Athene noctua (little owl): 141960560
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Entry
141960560 CDS
T11550
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
anoc Athene noctua (little owl)
Pathway
anoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141960560 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anoc03041
]
141960560 (PRPF38A)
Spliceosome [BR:
anoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
141960560 (PRPF38A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
GIP4
Motif
Other DBs
NCBI-GeneID:
141960560
NCBI-ProteinID:
XP_074762304
LinkDB
All DBs
Position
5:complement(join(7294088..7294130,7294350..7294398,7294741..7294838,7294919..7294945,7295479..7295591,7296143..7296253,7296414..7296499,7296984..7297105,7297630..7297789,7297862..7297991))
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AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERAPSPDHRRRGYRDLDKPRRSPAVRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggacggtgaaggacgcgcacagcatccacggcaccaacccgcagtacctg
gtggagaagatcatccgcacccgcatctatgagtccaagtactggaaggaggagtgcttc
ggcctgacggccgagctggtggtggacaaggccatggagctgaagtacgtggggggcgtc
tatggcgggaacattaagcctacgcccttcttgtgcttgacgctgaagatgctgcagatc
cagcccgagaaggacattatcgtagagttcataaaaaacgaggacttcaagtatgtccga
atgcttggtgcattgtacatgaggttgacaggcactgccattgactgctacaagtatctt
gaaccactgtacaacgactatcgcaaaataaaaagtcagaacagaaatggggaatttgaa
ctgatgcatgtggatgaatttattgatgaactactccacgaggaacgtgtatgcgatatc
attctgcctcgattacagaaacggtatgttctggaagaagctgagcaacttgagcctcgt
gttagtgctttggaagaagatatggatgatgtagaatctagtgaagaggaggaagaggaa
gatgaaaagctggaacgagcaccctctccagaccaccgcagaagaggctacagggacctt
gataaacctcgcagatctccagctgtgcgatacaggcggagccgaagcaggtctccaaga
aggcgaagccgctctccaaagagaagaagtccatcaccacgccgggagaggcatcgcagc
aaaagcccaagacgacaccggagcagatctagggagaggcgccacagatcaagatctaaa
tctccaggacatcatcgtagtcacagacacagaagtcattccaaatcacctgaaaggtct
aaaaaaagtcacaagaagagtcggcgagggaatgagtaa
DBGET
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