KEGG   Athene noctua (little owl): 141961574
Entry
141961574         CDS       T11550                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
anoc  Athene noctua (little owl)
Pathway
anoc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:anoc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    141961574 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:anoc03400]
    141961574 (TDP1)
DNA repair and recombination proteins [BR:anoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     141961574 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 141961574
NCBI-ProteinID: XP_074764629
LinkDB
Position
6:33948474..33995643
AA seq 607 aa
MLQEGAHGKWTVSSSDESTEENSDSEKPSTSSLLDAARGRTSGPQYPCSEARKAAHKRKA
SPLKLGDKSFSTETPPAGKQRASQEGLGWCLSSSDEEPEDQEKHGHKETQKEEIRDAPEE
RALNLCRDDELSESQQAEDYNETLSETQDTWDLLNGGNPFRFFLTKVTGIEQSYNSGALH
IKDILSPLFGTLMSSAQFNYCIDVGWLVRQYPQEFRKKPLLIVHGEKRESKAELLAQARP
YENISFCQAKLDIAFGTHHTKMMLLLYKEGLRVVIHTSNLIAEDWHQKTQGIWLSPLYPR
LPQGTTGSAGESETKFKSDLISYLMAYNSPALKEWIDLIQEHDLSETRVYLLGSTPGRYQ
GSDKEKWGHLRLRKLLKEHASSIPAQELWPVVGQFSSIGSMGADGSKWLCSEFQESLVAA
GSSVTSLLKCDVPVHLVYPTVNNVRQSLEGYPAGGSLPYSIQTAQKQLWLHSYFHKWSAE
VSGRSHAIPHIKTYMRPSPDFQKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLF
LPSAFGLDKGYFHVRGKMLSESKDSATYFPVPYDLPPEQYGSKDQPWIWNIPYTNAPDTH
GNMWVPS
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgcttcaggaaggtgcacatggaaaatggacagtatctagcagtgatgaaagtacagaa
gagaattctgatagtgaaaaaccctctacatcttcactattggatgctgcacgtggcaga
acaagtgggccacaatatccatgctctgaagctaggaaagctgctcacaagagaaaagct
tctcctctgaagctcggtgataaaagtttttctacagaaacacctccagcaggaaaacag
agagctagccaggaagggttaggctggtgtctttctagtagtgatgaagagcctgaagat
caggaaaagcatggccacaaagaaacacagaaagaagaaatacgtgatgcaccagaagaa
cgtgctctgaatctttgcagagatgatgaactctcagagagtcagcaagcagaggactat
aatgaaacactcagtgaaacccaagatacctgggatttgttgaatggcgggaaccctttc
aggttttttctcactaaagtcacagggattgaacagagctataattccggagccctgcac
ataaaagatattttgtctcctctttttgggacactcatgtcttctgcccagttcaactac
tgtatagatgtgggatggcttgtaagacagtatccacaggaattcaggaagaagccattg
ttaatagttcatggcgaaaagagagaatccaaagctgaactgcttgcacaagcacgccct
tatgagaacatcagcttttgtcaggctaaactggatattgcatttggaactcaccatacg
aaaatgatgttattgttatacaaagaaggtcttcgagttgtgatacatacatccaatctt
attgctgaagactggcaccagaaaactcagggaatatggctaagccctttatacccaagg
ctacctcagggaacaaccggttctgctggtgaatctgaaacgaaatttaagtctgaccta
ataagttacctgatggcttacaattctcctgcactcaaggaatggatagacctgattcaa
gaacatgatttatcagagacaagagtgtatctgcttggttctacccctggacgatatcaa
ggtagtgataaagaaaagtggggtcatcttaggctcagaaagcttttgaaagagcatgct
tcgtcaataccagcacaagaattgtggcctgttgttggacagttctcaagcattggttca
atgggagctgatgggtccaaatggctgtgctcggagttccaggagagcctggtggctgca
ggcagcagtgtgacatctctcctgaaatgtgatgttccagttcatttggtttatcctact
gtgaacaatgtgaggcagagtctggaaggctatcctgctggtggctcacttccgtacagt
atacagacagcacagaaacagctgtggttgcattcctattttcataaatggtcagcagaa
gtctcaggtcgaagtcatgctatacctcacattaagacatacatgagaccctctcctgac
tttcagaagattgcatggttcttagttacaagtgccaatctatctaaagcagcttgggga
gctctggagaaaaatggcacccaactgatgatccgttcatatgaactgggggtccttttc
ttgccttcagcatttggattggacaaaggttactttcatgtgagaggcaaaatgctttca
gaaagtaaggattcagcaacatactttcctgtaccttatgacctgccaccagaacagtat
ggaagcaaagatcaaccatggatttggaatattccttacactaatgcccctgatacacat
ggaaacatgtgggttccgtcgtga

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