KEGG   Athene noctua (little owl): 141962973
Entry
141962973         CDS       T11550                                 
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
anoc  Athene noctua (little owl)
Pathway
anoc04382  Cornified envelope formation
anoc04510  Focal adhesion
anoc04512  ECM-receptor interaction
anoc04518  Integrin signaling
anoc04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:anoc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    141962973 (COL4A4)
   04518 Integrin signaling
    141962973 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    141962973 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    141962973 (COL4A4)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    141962973 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:anoc04147]
    141962973 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:anoc00536]
    141962973 (COL4A4)
Exosome [BR:anoc04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   141962973 (COL4A4)
Glycosaminoglycan binding proteins [BR:anoc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   141962973 (COL4A4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 141962973
NCBI-ProteinID: XP_074767869
LinkDB
Position
8:complement(join(11488208..11488471,11489088..11489374,11491212..11491400,11492137..11492253,11494329..11494460,11495336..11495344,11495647..11495745,11496387..11496542,11497386..11497493,11499312..11499440,11500231..11500302,11504256..11504363,11504712..11504819,11505288..11505362,11506420..11506483,11507633..11507811,11508048..11508155,11508791..11508934,11510647..11510817,11511413..11511574,11512484..11512702,11513209..11513313,11514360..11514428,11515215..11515398,11515801..11515907,11517191..11517263,11520301..11520464,11520798..11520890,11521451..11521615,11522214..11522318,11523781..11523850,11528515..11528568,11529563..11529607,11530298..11530357,11531571..11531624,11532899..11532979,11533957..11533998,11534174..11534209,11534667..11534729,11535464..11535499,11535723..11535791,11538606..11538722,11540402..11540446,11541332..11541466,11552104..11552181,11554209..11554248,11556778..11556833))
AA seq 1681 aa
MALTKDSFERIKWLITAAWWLLIFFSAQEVDGGGYAYIDPCGGQDCSFCRCFPEKGSRGQ
PGELGAQGWIGSLGSTGPAGLPGEKGERGENGQPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGSEGPRGKHGLDGCNGSRGDPGFPGETGYIGPRGPYGNPGQKGEKGNAVYVSYFERGPP
GDRGDPGPPGMPGPRGSRGTTGPSGYPGQPGLPGIPGYPGLPGEQGNPGIGVDGQKGEPG
DVGLPGPPGSPLLVGPPGAQLFKGEKGQKGLPGVTGYRGPRGPKGILGRGEKGEKGIPGF
PGLRGNPGSYGHAGFPGMKGETGFAGFPGQPGYPGIQGDPGEKGPPGPPGTVGTPLLPIK
GPQGDPGFPGPAGDMGSVGPVGPAGLLGRPGDDGTSLPGLPGVSGAPGPQGFQGDPGFPG
TGESIPGRPGFPGPPGLPGQPGRQGLPGLPSIICTDRGIPGEPGAKGQTGLPGRKGEKGE
KGNQGLCSCSAGPPGRRGLQGPPGAQGKKGQMGYPGRHGEKGDPGLSGAMGLPGLPGIPG
SAGQHGEKGEKGDPGTVRIKGIKGERGPSGVPGFPGQRGNNGRDGELGLPGEKGAEGDSG
VPLPGDKGFPGVPGLPGVKGQMGLPGLGFPGPPGVRGSPGDFGDTGNVGPPGPKGQKGET
VFITLPYPGSPGPPGFKGVQGPKGFKGLPGHPGLNGFHGQKGHRGRPGAGIPGPEGFRGK
AGDPGDEGERGSTVDGKKGPPGPPGIDGQKGVPGDTTYGPPGIPGSRGLPGPPGSQGARG
DPGIPGLRGQPGTPGFPGAKGFRGPEGDTGAPGCPGFPGSPCDTALPGPPGLRGVMGLPG
PQGLPGFKGQRGDRGLAGPPGVKGLKGSSGSQGPPGPPGSRGHPGLPGNKGPPGFPGETG
SKGIQGPQGFPGLPGTQGPMGISGVKGEEGKVGPPGPSGECGDMGIKGERGPPGDSGCIN
IRLEKGKKGEPGFPGENGFRGERGEKGNTGFRGMPGFPGRNGVPGLPGDHGDTGLMGFPG
SRGFPGPKGFEGITGFQGQPGDQGDFGLPGIPGNPGLTGLKGSKGKRGDPTPLLGTRGRK
GPPGDPGLPGLCGFPGEKGSSGIQGQPGRPGSKGDPGYPGIPGFPGATGSQGLPGERGEK
GRHGILGPPGLQGLTGSQGRKGLPGLPGLDGLDGLKGQKGSTGAPGQSETGPPGYPGELG
PKGDRGEPGWPGISIPGPPGERGFPGFPGRRGPVGPTGPMGRYPDSASPGPPGDQGPPGL
DGIRGQPGNPGPPGETIFVRGDPGDTGIRGAPGNPGQRGQQGARGLPGNQGRGGPKGPMG
IHGPQGPPGATGQPGDQGFQGKPGPRGPTGFIGDPGEPGKTDDSCPAIPGPPGEAGQRGD
DGSVGLPGPVGHPGPQGRKGEEGSCGLPGQDGLPGAPGPPGDQGITGEQGFAGPQGPPGQ
TGIPGPPGPHIRSASGFLLVLHSQSDREPLCPQGMPKLWTGYSLLYLEGQEKAHNQDLGL
AGSCLPVFSTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPMTPLSEEEIQPYISRCAVC
EAPAQAVAVHSQDESIPPCPVNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDFRSA
PFIECQGQRGTCQFFANEYSFWLTTVMPELQFASAPLSGTLKEGQEQRRKISRCQVCLKH
G
NT seq 5046 nt   +upstreamnt  +downstreamnt
atggcattaacaaaggattcatttgaacggattaagtggcttatcacagctgcctggtgg
ctgctgatttttttctcagcacaagaagttgacgggggagggtatgcatatattgaccca
tgtgggggacaagattgttcattttgtcggtgctttccagaaaaaggatcaaggggtcag
cctggtgagctgggagctcaaggatggattgggtccttgggatctacaggaccagctggt
ctgccaggggaaaaaggagagagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgataagggccccactggagtcccaggatttcctggtttagatggtgttcctggatta
ccaggaagtgaaggacccaggggcaagcatggtttagatggctgcaatggctcaagagga
gatccaggatttccaggcgaaactggttatattggaccaagaggtccttatggaaatcca
gggcaaaaaggagaaaaaggaaatgcagtgtatgtgtcatattttgaaagaggacctcca
ggagacagaggtgatcctggaccccccggcatgcctggacctagagggtcaagaggtaca
acgggcccatctggatacccaggccaacctggcttgcctggtattccaggttaccctggt
ttgccaggtgaacagggaaatccaggtattggagtggatggacaaaagggggagccgggt
gatgttggacttcctgggccgcctgggtcaccactgttagttggacctcctggagctcag
ctgttcaaaggagaaaagggccaaaaaggactgcctggggtaacaggatacagagggcca
cgtggacccaaaggtatacttgggagaggagaaaagggtgaaaaaggcattcctggattc
cctggattgaggggtaatcctggttcttatggacatgcaggttttcctgggatgaagggg
gaaacaggatttgctggttttcctggacaacctggctatccgggcatacagggggatcca
ggagaaaaagggcccccaggtcctcccggaactgttggaactcctctgcttcctataaaa
ggtccacaaggagatcctgggtttccgggtcctgctggtgatatggggtcagttggacca
gttggtcctgcaggcctgctaggaagaccaggagatgatggaacaagtctgcctggtctg
ccaggagtaagtggggcaccaggacctcaaggttttcaaggtgaccctggtttccctgga
acgggtgaatcaatcccaggaagacctggatttcctggaccaccaggcctaccaggacag
ccaggaagacaaggcttacctggactacccagtataatctgtactgacagagggatccct
ggagaacctggagcaaaaggtcagacaggccttccgggaagaaaaggtgaaaaaggagaa
aagggaaatcaaggcctctgctcatgtagtgctggtcctcctggtcgccgtggtttgcaa
ggacctccaggtgctcaaggaaagaaaggacaaatgggataccctggaagacatggagaa
aagggcgacccgggtttgtctggtgcaatgggattaccagggctccctgggatacctggt
tctgctggacaacatggcgaaaaaggagagaaaggtgatccaggaacagttagaataaaa
ggaataaaaggtgaaagaggtcctagtggggttccaggatttccaggccaaagaggtaac
aatggcagagatggggaactaggattgcctggggaaaaaggagctgagggtgattctgga
gtaccactgccaggcgataaaggattccctggggttccaggacttcctggggtaaaagga
cagatgggattgcctggtttggggtttcctggccctccaggagtccgaggtagccctggg
gactttggtgatactggtaatgttgggccacctggtccaaagggccagaaaggtgagact
gtcttcattacattaccataccctggaagtccaggtcctcccggttttaaaggtgttcaa
ggaccaaagggttttaaaggactccccggtcatcctggactaaatggctttcacgggcaa
aaaggccatcgaggcaggccaggagcaggaatccctgggccagaaggctttcgaggcaaa
gctggtgatcctggtgatgaaggtgaaagaggatctacagttgatggtaaaaaaggccct
ccaggtccacctggcatagacggtcagaagggtgttccaggcgatactacatatggacct
ccgggaatcccaggcagcaggggactgccaggaccccctggttcacaaggagcaaggggt
gatccaggcattcctgggcttcgaggacagcctggtaccccaggatttccaggtgccaaa
ggttttagaggcccagaaggtgacacaggagcaccgggctgtccaggcttccctggttca
ccatgtgacacggccttaccagggccaccaggcctcagaggtgtcatgggcctgccagga
cctcaaggcttaccaggcttcaaaggtcagaggggagataggggcctagctgggccacct
ggagtcaaaggtcttaaaggctcttctggctcacaaggtcccccaggtcctccaggctcc
cgaggacatccgggacttccaggcaataaaggaccacctggtttcccaggagaaacagga
agcaaaggcattcaaggaccccaaggattcccaggactcccaggaacacaaggcccaatg
ggaatctctggtgtaaaaggtgaagaaggaaaagtgggtccacctgggcctagtggagaa
tgtggggatatgggaataaaaggtgaaagagggcctccaggagacagtggctgcattaac
atccgtcttgagaaaggaaaaaagggggaaccagggtttcctggtgagaacggatttaga
ggtgaaagaggtgaaaaaggcaatactggtttcagaggcatgccaggatttccagggagg
aatggtgtcccaggactgccaggtgaccatggtgacactggactgatgggctttccagga
tcacggggtttcccaggaccaaaaggctttgaaggaattacaggttttcaaggacaacca
ggtgaccagggtgactttggcttaccaggaatccctggaaatccaggactaactggccta
aaaggatctaaaggcaagagaggcgacccaactcctctgcttggtacacgtggtcgaaaa
gggcctcccggagatccaggattaccagggctctgtggattcccaggagagaagggttca
tcaggtatccaagggcaacctggaagaccaggatctaagggtgaccctgggtacccagga
atacctggatttccaggagctacaggttctcagggattgccaggagaacgtggagaaaag
ggaagacatggaattttgggacctccaggattgcaagggttaactggatcccaaggcaga
aaaggtcttcctggactgcccggactggatggcttggatggactgaaaggtcaaaaaggt
tctacaggagctccaggtcaaagtgaaacagggcccccaggatacccaggagaactggga
ccaaaaggagacagaggtgaacctggatggcctggtatttctattccaggccctcctgga
gaaaggggattcccaggattcccaggcagaagaggacctgttggacccactggacctatg
ggaagatatcctgatagcgcttctcctggtcctccaggtgatcaaggaccacctggttta
gatggcatcagaggtcagcctgggaatcctggtcctcctggagagactatctttgtgcga
ggagatccaggtgataccggtattcgaggggcaccgggtaatcctgggcagcgagggcaa
caaggagccagaggtcttccagggaatcaaggcagaggaggcccaaaaggtcctatggga
atccatggcccccagggtccacctggtgctacaggacaaccaggagaccaaggttttcaa
ggaaaacctggtcccagaggtcccacaggtttcataggtgaccctggtgaaccagggaaa
acagatgattcatgccctgcaatcccagggcctcctggagaagcaggacaaagaggagac
gatggctcggtaggactaccaggaccagtaggccaccctgggccccaaggaagaaaaggt
gaagaagggtcatgtggcctgccaggccaagatggcttacctggggcacctggaccacca
ggtgaccaagggattacaggagagcaaggatttgctgggccacaaggtccacctggccag
actggtatcccaggaccaccaggcccccatattagatctgcaagtggattcttgctcgtc
cttcacagtcagtcagacagagaaccactctgtccacaggggatgccaaaattatggact
ggctatagtctgctgtacttggaaggacaagagaaagctcacaatcaagatctcggtctg
gcaggatcttgtcttcctgtgtttagtaccatgccatttgcttattgtaatatcaaccaa
gtctgttactacgccagtcgaaatgataagtcttactggttgtcaagtgcggctccttta
ccaatgacaccactctccgaggaagaaatacaaccatatataagcagatgtgctgtatgt
gaggccccagctcaagcagtagcagttcacagccaagacgagtcgattcctccctgccca
gtgaactggaggagcctttggataggatattcctttttgatgcacactggatctggtgat
cagggtggtggacagtcccttatgtcacctggaagttgcctagaagacttcagatcagca
ccattcattgaatgccagggtcagcggggaacatgtcagttttttgctaatgaatacagt
ttctggctaacaaccgtgatgcccgaattgcagtttgcatcagcgccactgtcaggaact
cttaaagaaggacaagagcagaggagaaaaatcagtagatgccaggtgtgcctgaagcat
ggctaa

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