KEGG   Athene noctua (little owl): 141963439
Entry
141963439         CDS       T11550                                 
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
  KO
K20178  vacuolar protein sorting-associated protein 8
Organism
anoc  Athene noctua (little owl)
Pathway
anoc04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:anoc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    141963439 (VPS8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:anoc04131]
    141963439 (VPS8)
Membrane trafficking [BR:anoc04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    141963439 (VPS8)
SSDB
Motif
Pfam: Beta-prop_VPS8 TPR_Vps8 zf_RING_Vps8 VPS8_N Beta-prop_WDR36-Utp21_1st TPR_VPS8_2 zf-RING_Vps41 WD40_CDC20-Fz TPR_Vps41 zf-RING_11 zf_RING_Vps8_fungal Clathrin zf-RING_2 Beta-prop_WDR5 zf-RING_UBOX Beta-prop_WDR3_1st WDR55 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 141963439
NCBI-ProteinID: XP_074768910
LinkDB
Position
8:complement(join(2897821..2897970,2898689..2898769,2910120..2910288,2910959..2911128,2912549..2912629,2920143..2920225,2921683..2921761,2923140..2923243,2924019..2924061,2924528..2924617,2925346..2925487,2930438..2930484,2930911..2931000,2934580..2934678,2935680..2935764,2937190..2937272,2937689..2937745,2938925..2939044,2941246..2941317,2941908..2942027,2945125..2945197,2945979..2946021,2946307..2946358,2947775..2947864,2948830..2949052,2949565..2949611,2949989..2950078,2950951..2950997,2952115..2952205,2954400..2954435,2955102..2955176,2957758..2957928,2958986..2959066,2962299..2962406,2963245..2963304,2963401..2963554,2964205..2964272,2965673..2965759,2967302..2967426,2976639..2976693,2978114..2978146,2980004..2980097,2981794..2981924,2983694..2983762,2984677..2984805))
AA seq 1398 aa
MEAAPEQGPCPAAAAEAEPCPEPPAHRLSAAELDRELDSRSELIDDKEFDIPQVDTPPTL
ESILNETDDEEESFVLEDPFLLNIDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDSLSL
HGSVIRLSLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTSHGLALIFDQNQALRLCL
GSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHI
KFTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKVELRDH
PITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAIQNSVNPMLA
FCRGDVVHFLLVKRDDTGAIHVTKQRQLHLHYDLINFTWINSRTAVLLDSVEKLHVIDRQ
TQEELETIEISEVQLVYNSSHFKSLATGGNVSEALALVGEKACYQSISSCGGQIFYLGTK
SVHVMALRSWRERVDHLLKQERLTDALALAWSFYEGKAKAVVGLSGDTNKRKAVIADRMV
EILLHYADRTLKKCPDQGKIQVMEQHFQDVVPVIVDYCLLLQRTDLLFNQIYDKMGENSV
AKGIFLECLEPYILSDKLMGITAQVMKDLLLHFQDKNRLENLEACIVHMDITSLDIQQVV
LLCWENHLYDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKSLTDEQVVMGNKLLVYIS
CCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSTEGSVDEEVYPYVRTLLHFDTREFLN
VLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPNNTLF
VNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIQMAEKAEFYQICE
FMYERELRYDKIIGCYLRDPVRKEEVFNYIHNILSMPGYSAEEKQLVWQKALEHIEELLL
LSPCKAADLVAIHFSEQIESIITNLQDQFLLFQFLRSLLDPREGINQDLIHLPPCITEQF
IELLCQYSPAQVLETLKVLEYCRLEEAIQITQKHQLHEASSYLLEKKGDIHGAFLVMLER
LQSKLLMLTQEDESSAEQPLLENIEDTLMKTIALCQRNSHNLDQQQREALWFPLLEAMMS
PQKLSGSSQCRYSESLKSLTMQVLNNMAAFIALPSILQRILQDPVYGKGKLGEIQGLVLG
MLDTFNYEQTLLETTTSLLNHDLHWSLCNLRASVTRGLTPKQDYCCICLQQYKRRQETAD
EIIVFSCGHLYHSLCLLSKECGTVTKGLMRWMCYKCNSSNKGGKLIENFSELKKGSGASS
AQTSSESLLDPQQIQAFDQLCRLNRGTSRLALLTELSRGHGGEKHGLLSVSHGDPATSSV
FQNENFQLHLAPPPLAED
NT seq 4197 nt   +upstreamnt  +downstreamnt
atggaggcggcgccggagcagggcccctgccccgcggccgcggcggaggccgagccgtgc
ccggagccgcccgcgcaccggctgagcgcggcggagctcgaccgcgagctggactcccgc
agcgagctgatcgatgacaaagaatttgacattcctcaagttgatactcctccaacactg
gagagcatcttaaatgagactgatgatgaagaagagtctttcgttttggaggatcccttt
ctcttgaacattgataacacagatacacattcctatgacacatcttctgtagcaagctct
gacagtggggaccggacacatctgaaaaggaagaaaaagctccctgattctctctcactc
catggatcagttatacggctctcgcttctgaaaggaatttctgcccaaatagtatctgca
gcagacaaagtggatgctggcttgcccactgcaattgcagcatcaaatctgatagcagtg
gggacttcccatgggttagcactgatatttgatcaaaaccaggctcttcggctgtgtctg
ggcagcactgctgttggggcccagtatggggctatctctgctctcagtatcaacaatgac
tgttcgaggctcctgtgtggctttgcgaaaggacagatcacaatgtgggatctggccagt
gggaagctgctacgatcaataacagatgcccacccaccaggaacagccattttgcacatc
aagtttacagatgacccgacgcttgcaatttgcaatgacagcggaggctccgtatttgaa
ctgtcatttaagagggttatgggagtgagaacgtgtgaatctcgatgtctcttcagtggc
tcaaagggggaagtttgctgtattgaaccattacatgcaaaagttgagctgagagaccat
cctatcacccagtattcactgctggccatggcctccttaacaaagatactggttattggc
ctgaagccatctctgaaagtgtggatgacctttccttacggtcgtatggacccttctagt
gtccctcttctggcgtggcactttgtggccatacagaactctgtgaaccccatgcttgca
ttttgtcgaggagatgttgttcattttcttctggtaaagagagatgatactggtgcaata
catgtcactaagcagaggcagcttcatctacactatgacctcatcaactttacttggata
aactcacggacagcagtgcttctggacagtgtggagaagctgcatgttatagatcgtcag
acacaggaggagctggagaccatagagatctcagaagttcagctagtctacaacagcagc
cacttcaaatcactggctacaggaggcaacgtcagcgaagccctggcattggttggagag
aaagcttgttatcagtccatcagcagctgtggtggtcagatcttttaccttggaactaag
tctgttcacgtcatggcattgagaagctggagagagagagttgaccacctcctgaaacaa
gagcgtctcactgatgccctggctctagcttggtctttttatgaaggtaaagcaaaggct
gtagtaggcttgtctggggacacaaacaagcggaaagcagtcattgcagacagaatggtt
gaaatccttctccattacgctgatcggactttgaagaaatgtcctgaccaaggaaaaatc
caggttatggagcaacattttcaggacgtggtgcctgtcatagttgattactgtctcttg
ctccagcgcacggatctattatttaaccagatatatgataagatgggtgagaattctgta
gctaaaggcatctttctggagtgcttggagccatatatcttaagtgataagctgatggga
atcacagctcaagtgatgaaagacttgctgcttcacttccaagacaagaacaggttggaa
aatttggaagcctgcattgtgcatatggatatcaccagcttagacatacagcaggtagtt
cttctgtgctgggaaaaccatctctatgatgccatgatctatgtctacaacagtgggatg
aatgacttcattagtcctatggagaagctgttcaaagtcattgctcctccactgaatgct
gggaagtctctcacagatgagcaggtggtaatgggcaacaagctgcttgtatatataagc
tgctgcttggcaggccgtgcgtatccattgggcgatattcctgaagatctggtacctttg
gttaaaaatcaggtcttcgaatttctcatccggctgcattcaactgagggatctgtggat
gaagaggtttacccttatgtccgtaccttgctgcactttgacactcgggaattccttaat
gttcttgctctgacttttgaagactttaagaatgacaagcaagctgtggagtatcaacag
agaattgtggacatacttctgaaagtcatggtagagaattctgacttcaccccgtcacag
gttggctgtctctttaccttccttgcccgtcagcttgccaagcccaacaacacattgttt
gtgaacaggacactttttgaccaggtccttgaatttctgtgcagtccggatgatgactcc
cgccattcagagaggcagcaggtccttttagaattgctccaggcaggagggatagtacag
tttgaagagagccgtcttatccaaatggcagaaaaagctgaattctatcagatttgcgag
ttcatgtatgaacgagagcttcgctatgacaagataattggctgttacctgcgtgaccca
gtgagaaaagaagaagttttcaactatattcacaacatcctgtccatgcctggctacagt
gctgaagaaaagcagttggtgtggcagaaagctttggaacatatagaggagttgctgttg
ctgagcccgtgtaaagcagctgacttggtagccattcacttcagtgagcagattgagagc
atcattacaaacctccaggaccagttcttactctttcagtttctgaggagtctacttgat
ccaagagaaggcattaaccaagacctgatacacttaccaccctgcatcactgagcagttc
attgagctgctgtgtcagtacagcccagcccaggttctggagacgcttaaagtcctggaa
tactgcagactggaagaagccatccagataacccagaaacaccagctccatgaagcttct
tcatatttactggagaagaagggagatatccatggtgcctttttggttatgcttgagcga
ttgcagagcaagttgctgatgcttacacaagaggatgaaagctcagctgagcaacccttg
ctggaaaatattgaagataccttaatgaaaacaattgccctttgccagagaaattcacac
aatttagaccagcaacagcgagaggccctctggtttcccctgctggaagctatgatgtcc
ccacagaaattgtctggttcttcacagtgtcgatactccgaatctttgaagagtttgaca
atgcaagtgctgaacaacatggctgcatttatcgctcttccttcaatcctgcagagaatt
ctacaggatccagtttatggaaaagggaagctcggagaaattcaaggacttgtcttggga
atgctggacactttcaactatgaacaaactcttttagagacaactacgagtcttttaaac
catgatctccactggtccctgtgtaacctaagagcttctgtcactagagggcttacccca
aagcaagattactgctgcatttgtctacaacagtacaaaagaaggcaagaaactgctgat
gaaataattgttttcagctgtggccacttgtaccattcgctgtgtctgctgagtaaagag
tgtgggacagtaactaagggcctgatgaggtggatgtgctataaatgcaactcaagtaac
aagggaggaaaactgattgagaacttctcagagctaaaaaaaggaagtggagcatcctca
gcacagacaagttcagagtctctgttggatcctcagcaaatccaagcttttgaccaactc
tgccgactcaaccgaggaacctccagactggctctgctgacagaactgtctcgcggccac
ggcggtgaaaagcatgggctgctcagcgtttcccacggtgacccagccaccagcagcgtc
ttccagaacgagaatttccagctccacctggccccccctccgctggctgaagactag

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