Athene noctua (little owl): 141965888
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Entry
141965888 CDS
T11550
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
anoc Athene noctua (little owl)
Pathway
anoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
anoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141965888 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anoc03019
]
141965888 (CLP1)
Enzymes [BR:
anoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
141965888 (CLP1)
Messenger RNA biogenesis [BR:
anoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
141965888 (CLP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
AAA_18
TniB
MMR_HSR1
ATP_bind_1
AAA_16
AAA_22
CbiA
Sigma54_activat
nSTAND3
Motif
Other DBs
NCBI-GeneID:
141965888
NCBI-ProteinID:
XP_074774166
LinkDB
All DBs
Position
14:join(12411229..12411834,12413006..12413677)
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AA seq
425 aa
AA seq
DB search
MADDGGEEKKQVAKFELERETELRFEVEASQTVQLELLTGMAEVFGTELTRNKKFSFDAG
AKVAVFTWHGCTVQLSGRTEVAYISKDTPMLLYLNTHTALEQMRRQAEREDERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSL
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDDR
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTADSPDDNISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacggcggcgaggagaagaaacaggtggccaagttcgagctggagcgggag
acggagctgcggttcgaggtggaggcctcgcagacggtgcagctggagctgctcactggc
atggctgaggtcttcggcaccgagctcacccgcaacaagaagttcagcttcgatgccggc
gccaaggtggccgtcttcacctggcacggctgcaccgtgcagctcagcggccgcacggag
gtggcctacatctccaaggacacccccatgctgctctacctcaacacccacacggcgctg
gagcagatgcggcggcaggcggagcgggaggatgagcgcgggccccgtgtcatggtggtg
ggacccaccgatgtgggtaagtcaaccgtgtgccgcctgctgctgaactatgcagtgcgg
ctgggccgccggcccaccttcgtggagctggacgtgggccagggctctgtctccatcccc
ggcaccatgggcgctctctacatcgagcggccagccgacgtggaggagggcttctccctc
caggccccgctcgtctaccacttcggctccaccacacctggtaccaacatcaagctctac
aacaagatcacatcacgcctggctgacgtcttcaaccagcgctgtgaggtgaaccgccgc
gcctcagtcagcggctgtgtcatcaacacctgcggctgggtgaagggctcgggctaccag
gcactggtgcacgctgcctccgccttcgaggtggacgtggtggtggtgctggaccaggag
cggctctacaatgagctgaagagggacctgccccacttcgtgcgcaccgtcctgctcccc
aagtccggcggggtggtggagcgctccaaggacttccgccgggagtgccgggatgaccgc
atccgcgagtatttctacggcttccggggctgcttctaccctcacgcctttgacgtcaag
ttctctgacgttaagatctacaaggtgggggctcccaccatcccggactcctgcctgccc
ctgggcatgtcacaggaggacaaccagctgaagctggtgccggtgacgccggggcgggac
atggtacaccacctcctcagcgtcagcaccgcagacagccccgacgacaacatctctgag
accagcgtggccggtttcatcgtcgtcaccggcgtcgacctggagcgacaggtcttcacc
gtcctctcaccagctcctcggcccctgcccaagaactttctcctcatcatggacatccgc
ttcatggacctcaagtag
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