KEGG   Athene noctua (little owl): 141966731
Entry
141966731         CDS       T11550                                 
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
anoc  Athene noctua (little owl)
Pathway
anoc03015  mRNA surveillance pathway
anoc05164  Influenza A
Brite
KEGG Orthology (KO) [BR:anoc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    141966731 (CPSF4)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    141966731 (CPSF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:anoc03021]
    141966731 (CPSF4)
   03019 Messenger RNA biogenesis [BR:anoc03019]
    141966731 (CPSF4)
Transcription machinery [BR:anoc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     141966731 (CPSF4)
Messenger RNA biogenesis [BR:anoc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     141966731 (CPSF4)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_3 zf-CCCH_2 zf-CCCH_12 zf-CCHC zf-CCCH_4 zf-CCCH_RBM22 zf-CCCH_DUS3L zf-C3H1 zf-CCHC_3 Nab2-like_zf-CCCH_
Other DBs
NCBI-GeneID: 141966731
NCBI-ProteinID: XP_074775872
LinkDB
Position
15:complement(join(6813053..6813121,6814452..6814544,6815418..6815490,6815948..6816041,6816195..6816290,6817081..6817233,6817749..6817799,6818707..6818809))
AA seq 243 aa
MQELIASVDHIKFDLELAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPTCKFMHPRFELPMGTTEQPP
LPQPTQTQQKRTPQVIGVMQSQNNNTGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFL
SGQ
NT seq 732 nt   +upstreamnt  +downstreamnt
atgcaggagctcatcgccagcgtggaccacatcaagttcgacctggagctggctgtggag
cagcagctgggggcgcagccgctgccctttcccggcatggacaagtcaggcgcagctgtc
tgtgaattttttttaaaagcagcctgtggaaaaggcggcatgtgcccgtttcgacacatc
agtggggaaaagacagttgtttgcaaacactggctacgaggactgtgcaaaaagggagac
cagtgcgagtttctgcatgagtacgacatgaccaagatgcctgagtgttacttctactcc
aaatttggggaatgcagtaacaaagaatgtccattcttgcacattgacccggagtctaag
atcaaagactgtccctggtatgacagaggcttctgtaaacatggtcccctctgcagacac
cgacacactcgaagagtcatttgtgtgaattacctagtaggattctgtccagagggacct
acctgtaaattcatgcaccctcggtttgaactgccaatgggaaccacagagcaaccacca
ctgcctcaaccgacacaaacacagcaaaagaggacaccccaagtcattggagtcatgcag
tctcaaaataacaacactgggaacagaggaccccgtccgttggagcaggtcacgtgctac
aagtgcggtgaaaaaggtcattatgccaacagatgcaccaaaggacatctggcctttctc
agtggacagtga

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