KEGG   Athene noctua (little owl): 141968637
Entry
141968637         CDS       T11550                                 
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
anoc  Athene noctua (little owl)
Pathway
anoc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:anoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141968637 (PRPF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:anoc03041]
    141968637 (PRPF4)
Spliceosome [BR:anoc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    141968637 (PRPF4)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st DSE1_N PRP4 Beta-prop_EML ASA1 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_Vps41 WD_LRWD1 Beta-prop_IFT140_1st WD40_like WD40_RFWD3 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 141968637
NCBI-ProteinID: XP_074779655
LinkDB
Position
20:join(11660686..11660757,11661497..11661674,11661883..11662069,11662298..11662385,11663142..11663221,11663476..11663569,11664483..11664577,11664879..11664937,11665569..11665692,11666866..11666955,11667251..11667373,11667516..11667623,11668334..11668452,11668628..11668821)
AA seq 536 aa
MASVRAPAARGGARPAVRAPAPAEATKSKPAEESDAPPPKRAPIFYGSLEEKERERLAKG
ESGLLGKEGMKAAIEAGNINISSGEVFDLEDHMSERQAEVLAEFERRKRARQINVSTDDS
EVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQTW
YHEGPRSLKTARLWLANYSLPRAVKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNFCS
QIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHNTNVGAIVFHPKAT
VSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHS
WRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGH
LKEIYGVNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLL
TGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq 1611 nt   +upstreamnt  +downstreamnt
atggcctccgtgcgggcaccggcggcgcgcggtggcgctcggcccgccgtgcgggctcct
gcgcctgcggaggccacaaagagcaagcctgcagaagaaagcgatgctcctccacccaag
agagcccccatcttttatggcagtttggaagaaaaagaaagggagcgtctggcaaaagga
gaatcggggctgctgggaaaagaggggatgaaagctgcgatcgaggctggcaacatcaac
ataagcagcggtgaggtctttgatctcgaagaccacatgagcgagcgacaggcggaagtg
ctggctgagtttgagcgcaggaagagagcccggcagatcaacgtctccactgacgactcc
gaagtgaaagcctgtttgcgagcccttggggagcccatcacgctctttggagaaggtcct
gcagaaaggagggagagattaagaaatatcctttcggtggttggcacagacgcattaaaa
aagaccaggaaagatgatgacaggtctaaaaaatccaaagaagagtatcaacaaacctgg
tatcatgaaggaccacgcagtctgaaaacagcgaggctgtggcttgctaactactcactc
cccagggcagtgaagcgactagaagaagcccggctgctcaaagagatcccagaggcaacc
aggacatcgcagagacaggagctgcacaaatccctgcgatccttgaataacttctgcagt
cagattggagatgatcgcccactctcctactgccacttcagccccaattccaaactcctc
gctactgcctgctggagtggattgtgcaagctctggtctgtgcctgactgcaaccttgtt
cacactttacgaggacataacaccaatgtaggagcaatagtctttcatcccaaagccact
gtctccctagacaagaaggatgttaacctggcctcctgtgcggctgatgggtctgtcaaa
ctctggagccttgaaagtgatgaaccggtggcagatattgaaggacacagcatgagagtg
gcacgtgtgatgtggcacccctctgggaggttcctgggtactacctgctatgatcactcg
tggcgcttgtgggacttggaagctcaggaagaaatcctccatcaggaggggcacagcaaa
ggggtctatgacatcgcctttcacacggatgggtctctcgctggcacgggtgggctggat
gcttttggccgggtgtgggacttgcgcacaggacgctgtatcatgtttctagaagggcac
ctgaaggagatctacggcgttaacttctcgccaaatggataccacgttgcaactggcagt
ggtgacaacacttgcaaggtgtgggacctccgccagaggaagtgcatctacaccattcct
gcccatcagaacctggtgaccggggtgaaatttgaacccaatcacggtaacttcctgctc
acgggcgcttacgacaacaccgcaaagatctggactcaccccggctggtcgcctctgaag
acgctggctggtcacgagggcaaggtgatgggactggacatctccctggacggccagctg
atagccacctgctcctacgacagaaccttcaagttgtggacagcggagtag

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