Athene noctua (little owl): 141968800
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Entry
141968800 CDS
T11550
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
anoc Athene noctua (little owl)
Pathway
anoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
anoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141968800 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anoc03019
]
141968800 (NUP188)
Messenger RNA biogenesis [BR:
anoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141968800 (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141968800
NCBI-ProteinID:
XP_074780028
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All DBs
Position
20:complement(6605433..6634727)
Genome browser
AA seq
1737 aa
AA seq
DB search
MAAGRQCARSSRELWTILLGRSALREPAQIAAELNKHWQRLLEGLSYYKPPSTTSAEKIK
ADKDVSAPLKELGLRVSKFLGLDEEQCVQLLECYLQEDYRGTRDSLKTVLQDERQSQALM
LKLADYYYEERICVLRCVLHLLTYFQDERHPYTAQYFQCVEKLDKELVPNYRKQFEALYK
AEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEVIFLYYAYFEMAPDELLAFAKMFKEQ
GFGTRQTNRHLVDESMDHLVDRIGYFSALILVEGMEIDSLHERALDDRTEEHKLANNERI
HQEMDNQLLQLGDVSHHALVLLAWALLRHTVNPEESTNVIRRMGSTAIQLNVFQYLTKLL
RSLSSGGKNCTASTACMCIYGLLSFVLTSLELHTLGNQQDIIDAACEVLAASSIPQLFWK
TEPTAGLGIILDSVCGMFPHLLTPLLQLLQALVSDKSTAKKVYSFLDKMSFYIELYKHKP
PDVISHEDGTLWRRQAPKLLYPLGLGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWTL
FTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDVSIADCLLPITSRIYMLLQRLT
TVISPPVDVIASCVNCLTVLAARMPAKVWTDLHHTGFLPFVANPVSSMNHMISAEGMNAG
GYGNLLMSIEQPQGEYSVTISFLNLVTTLVRGQLGSTQSQGLVPCIVFVLKEMLPNYHKW
RYNSHGVREKIGCLILQLIHAILNLCPEMDPRSSNAPSLQSLCIFSLANTEAGQAVINIM
GIGVDTIDMVMASQLSSDESQGQGQLLIQTVKLAFSVTNNVIRLKPPSSVVSPLEQALTQ
HGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLT
RLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGEWSCLQVVL
ELIDSKQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTNPLFGTLPP
PSESSELSVLDTCALIMKIICLEIYYVVKGSLDQSLKDTLKNFSSKKRFAYWSEYVKLLA
YHVAETEGSSCASMTEYQMLISAWRMLLIISTSHADIMHLTDPAVHQQLFLDVLNGTKVL
LLVPMSVSCLQLGSMLCTLLLILLKQWKSELGSVDKIINSLTQILEGVLQADQQMMEKTK
AKVFSALITVLQMKEMKVNEIPQYSQLVLSVCETLQDEVIALFDQTRHSLTLGDATDDKD
SMETDDASRVKHKDQRDGVCVLGLHLAKELCEVDEDGDYWLQITRKVPVLPTIFTALEIS
LRVKQNLHFTEASLHLLLTLARTQQGAAAVAGAGVTQSVCLPLLSVYQLSTNGAIQTSAS
SRKSLDVPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERILQCLNAVRTVQSL
ACLEEADHTVGFILQLSNFTKEWHFHLPQLMRDIQVNLCYLCQACTSLLHSRKMLQHYLQ
TKNGDSLPSSVTPRVQRNPQASSKHPSPESEAAEQKALLTVQYSLLKILSKSLAALRHFT
PDVCQILLDQSLDLAEYNVLFVLSFTTPAFDSDVAPSFGTLLATVNVALNMLGELDKRKE
PFPQAAGLNMQEGTKTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPRDKQRMKQELSSE
LSTLLSSLSRYFRRGGPSSPASGVLPSPQGKSASKLGPEGQEPLFQLVQAFVRHVQR
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcaggcagtgtgcgaggagcagcagggaattatggacaattcttctgggc
agatcagctttaagagaaccagcacagattgcggcagaattgaacaaacactggcagaga
ttgttagagggactttcatattataaaccgccaagtacaacttcagcagaaaaaataaaa
gctgataaagatgtatctgctccactgaaagagttgggtctgagggtcagcaagtttttg
ggtctggatgaagagcagtgtgtgcaattgttagagtgttatcttcaagaggattacaga
ggaacaagggactccctgaagacagttcttcaggatgaaaggcagagtcaggctctgatg
cttaagcttgctgactattactatgaggagaggatctgtgttctgcgctgtgtcctccat
ctactcacttactttcaggatgagaggcacccttacacagcacaatacttccagtgtgtt
gaaaagttggacaaggaactagttcctaattaccggaaacagtttgaagcactgtacaaa
gcagaagctcctacatgggaaacgcatggaaatctcatgacagaacgtcaggtttcccgc
tggtttgtgcagtgcctccgtgaacagtccatgctcctggaagtcatcttcctctactat
gcatacttcgaaatggcacccgatgagctgctggcatttgcaaagatgttcaaagaacag
ggatttggcactagacaaaccaacagacatttggtggatgagagcatggatcacctggtg
gatcgtattggctactttagtgctcttattctggtggaaggcatggaaattgactccctc
cacgagcgtgctttggatgacaggacagaggagcacaagttggccaataacgagcgcatc
caccaggagatggacaatcagctgctgcagttaggggatgtctcacatcatgctctggtg
cttttggcctgggctctgctccgtcacactgtaaacccagaggagtcaacaaacgttatc
aggagaatgggcagcacggctatccagctgaatgttttccagtatctgacaaagctgctg
agatcgctgagcagtggggggaagaattgtactgccagcacagcctgtatgtgtatttat
ggacttctctcctttgtcctgacatcactggaattacatacattgggcaatcagcaggat
ataattgatgctgcatgtgaagttctggcagcttccagcattcctcagctcttctggaag
acggaacctactgcaggtctgggtattatcctggacagtgtgtgtggaatgttcccccat
cttcttactcctctcctccagctgctccaagcccttgtgtctgataagtctacagcaaaa
aaggtatacagtttcctggataaaatgtccttctatattgaactgtacaagcataaacct
cctgatgtgatctctcatgaagatggcacactttggcgaagacaggctccaaagctcctc
tatcctcttggactaggtcaaacaaatctgcggatacctcagggaacagtgggccaagtg
atgctggatgatcgggcttatttggtacgatgggaatattcctacagcagctggacactg
tttacctgtgagattgagatgctgctccatgtcgtatcgacagcagatgtgattcagcat
tgccagagggtcaagcccataattgatctggttcataaagtcatcagcactgatgtatcg
atagcagattgccttctgccaatcacgtcgcgaatctacatgctcctgcagaggctaaca
actgtaatctctccccctgtggatgttattgcttcttgtgtcaactgtttgacagtactg
gctgctcggatgccagccaaggtttggactgaccttcaccatacagggttcttaccattt
gttgccaatccagtgtccagtatgaatcacatgattagtgcagagggaatgaatgctggg
ggctatggaaacctcctgatgagcatagagcagcctcagggcgagtacagtgttaccatc
tccttcctgaacctggtaacaactcttgtccggggacaacttggtagcacccagagccaa
ggccttgtgccctgcattgtgtttgtcctgaaggagatgttaccaaattaccacaaatgg
cgttataactctcatggagtgagagaaaaaatcggatgcctaattctgcagttgatccat
gctatactgaatttatgccctgaaatggatcctcgcagtagcaatgcccccagcctgcag
tccctgtgcatcttcagcctggccaacaccgaggcagggcaagctgtcattaacatcatg
ggaattggtgtggacactattgatatggtaatggcctcccagcttagtagtgatgagtca
caaggccaaggtcaactgctgatccaaacagtgaagctggcattctcggttaccaataat
gtcatccggttgaagcccccctctagtgtagtatctccattagaacaggcacttactcag
cacggtgctcatggaaacaaccttattgcggtcttggccaaatatatctaccacaagcat
gaccctgcacttccacgcctggccatccagttactcaaacgactggctacggttgctccc
atgtctgtttatgcctgccttggcagtgatgctgctgccatccgtgatgccttcctcacc
cgcctgcagagcaagatcgaggacatgcgtattaaggtcatgatactggagttcctcaca
gttgcggtggagacacaacctgggctcattgagctgttcctgaacttggaagtgaaggat
ggcagtgatgggtcgaaggaattcagcttaggggagtggagttgcctccaagtagtctta
gagctgatagactccaaacaacaggacaggtactggtgccctcccctcttgcaccgggct
gccattgccttcctgcatgctctgtggcaggaccgtcgggatagcgccatgctagttctg
aggacaaagccaaagttttgggaaaacttaaccaatcccctctttgggacccttcctcca
ccttcagaatcatcagagctcagcgtcttggatacttgtgccttaatcatgaaaatcatc
tgtttggagatctactatgttgtcaagggctcactggatcagtccctgaaagacacgctg
aagaatttctcctccaaaaagcgctttgcctattggtcagaatatgtgaagttactggca
taccacgtggcagagacagagggtagcagctgtgcctccatgacagaatatcaaatgctc
atctcagcctggcggatgctgctgataatctctactagccatgcagatataatgcatctg
actgatcctgcagttcatcagcagttgtttctggatgtgctaaatgggaccaaggttttg
ctcctagttcccatgtcagtgtcctgtctgcagctggggtctatgctatgtacccttctt
ctgatcctgctcaaacagtggaagagcgagttgggttcagtggataaaatcataaactcc
ttgacgcagattctggagggagtactacaggcagatcagcagatgatggagaaaaccaaa
gccaaagtgttctcagctcttatcactgttctgcaaatgaaggagatgaaagtgaatgag
atcccacagtactcccagctggtgctgagtgtgtgtgaaacactccaagatgaggtcatt
gcgctctttgatcagactcgacacagcctgaccttgggagatgctacagatgacaaggac
agcatggaaacagatgatgcctcccgagttaaacacaaagaccagcgagatggggtgtgt
gttctgggtctgcatctggctaaagagctctgtgaagttgatgaagatggagactactgg
ctgcagattactaggaaagtccccgtgcttcctactatctttactgctctggagatcagc
ctgagagttaaacaaaaccttcacttcacagaggcctcattacatttactgctgacctta
gcaaggactcaacagggagcagcagcagtggccggagctggtgtcacgcagagtgtctgc
ctgcccctcctcagcgtgtaccagctcagcactaacggagccattcagacatctgcttcc
tctcgaaagtctctggatgtcccctcttggcctggggtctatcgtctctccatgtcgttg
atggaacgccttcttaaaacacttagatacaacttcctgacagaagcactggactttgtg
ggggtccatcaagagaggattcttcagtgtctgaatgcagtacggacagtacagagcttg
gcctgtctagaagaggctgatcacactgttggcttcattcttcagctctcaaatttcaca
aaggagtggcatttccacctgccacagcttatgagggacatacaggtgaacctgtgttac
ctgtgtcaggcctgtacctccctcctgcacagccgcaaaatgctccagcactacctgcag
acaaaaaatggtgattcccttccatcaagcgtgactccacgagtgcagcgtaatccccaa
gcctcctccaaacatcccagtcctgagtcagaggcagcagagcagaaagcactgcttacg
gtgcagtacagcctcttgaaaatcctcagcaaatctcttgctgcactgcgccatttcacc
cctgatgtctgccagatccttcttgatcagtcgctggaccttgccgagtacaacgtgctc
tttgttttgagtttcaccacaccagcctttgattcagacgtcgcaccttcctttgggacc
ctccttgccacagtcaacgtggcccttaacatgttgggagagctggataagaggaaggaa
cctttccctcaggctgcagggctgaatatgcaagagggaaccaaaaccctcaagtctctg
ctcatgtttacaatggagaactgtttctacctgctcatctcccaggccgttcggtacttg
agagacccagctgtgcacccccgtgataagcagcggatgaaacaggagctcagctctgag
ctgagtacactgctctccagcctgtctcgttacttccgccgtggtggcccctcttcacct
gccagcggggttcttccctctcctcaaggaaagtcggcctccaagctgggtcccgagggg
caggagcctttgtttcagctcgtgcaggcctttgtccggcacgtgcagagatag
DBGET
integrated database retrieval system