Athene noctua (little owl): 141970376
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Entry
141970376 CDS
T11550
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
anoc
Athene noctua (little owl)
Pathway
anoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141970376 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anoc03041
]
141970376 (DDX42)
Enzymes [BR:
anoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141970376 (DDX42)
Spliceosome [BR:
anoc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
141970376 (DDX42)
Complex B
141970376 (DDX42)
Complex C
U2 SnRNP specific factors
141970376 (DDX42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
DUF460
Motif
Other DBs
NCBI-GeneID:
141970376
NCBI-ProteinID:
XP_074783044
LinkDB
All DBs
Position
25:complement(3578578..3597751)
Genome browser
AA seq
936 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFAITPGKKEEPKLSQQSHSAFGTAGSSAAFAKSGPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSSNVELPYIPAENSPTRQQFHSKSADSDSDDDPLEAFM
AEVEDQAARDMKRLEDKDKEKKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQ
VRSVASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKV
ISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNPWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSENSDRGNNNSVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLNNQ
KTGSSSAGASGWTSAGSLNSVPTSSAQQNAANPDSPIAAAAAAKGVPGFTSTGNLSSVPT
FPSVGVQGFNNTTASTNNREAIGSSGPGVAAGGGGGVVRERYNDNRNSRHNEVPRRGEGG
GRYNDVQRHGEGGSRHSDAYRHGEGRHGDGHRHAESRHFPDGGGGRNNGDSRNSSDGRNN
ENRNGENRKDGNSRDNKTDGFAVPEPPKRKKSRWDS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaataaaggtggacctggtactaagagaggctttggttttggtggatttgcc
ataacgcctggaaaaaaagaggagcctaagctctctcaacagtctcatagtgcttttgga
acagctggttcttctgctgcatttgcgaaatcgggacctcctcagctgccttctttctac
aaaatcgggtcaaagcgagcaaattttgacgaagagaatgcatactttgaggatgaagag
gaagattccagcaatgtcgaattgccatacattcctgcagagaattcccccactcgccag
cagtttcattccaaatcagcagactctgacagcgatgatgatcctctggaggcattcatg
gctgaagtggaggatcaagctgctcgagacatgaagagacttgaagataaagacaaagaa
aaaaagaatgttaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcgctacatggctgaaaaccccactgctggtgtggtccaagaagaggaagaggataat
ctggagtatgatagtgatgggaatccaattgcaccatccaaaaaaatcattgatcctctt
ccacctattgaccattcagagattgaatatccaccatttgagaaaaatttctatgatgag
catgaggagatcaccagcctgaccccgcagcaagtggtggagttacggcataagctaaat
ctgcgggtctctggtgctgctcctccaaggcctggcagtagttttgctcattttgggttt
gatgagcaacttatgcatcagattagaaaatccgagtatacccagcccactcctatccag
tgtcagggtgttccagttgcactaagtggcagggatatgattgggatagctaagactgga
agtggaaaaacagcagccttcatctggccgatgctgattcacatcatggatcaaaaggag
cttgaaccaggggatggtcccattgcagtgatcgtctgcccaaccagagagctttgccaa
cagatccattctgaatgtaagcgctttggtaaggcatataatctgcgctccgtagctgtg
tatggaggaggaagcatgtgggagcaagccaaagccctccaggagggggcagagatagtt
gtctgcacaccaggtcgtttgattgatcatgtgaaaaagaaagctacaaaccttcaaaga
gtcacttaccttgtgtttgatgaagctgacagaatgtttgatatgggttttgaatatcag
gtcagatcagtcgcaagccacgtacgtcctgacagacagaccctcttgttcagtgccact
ttccgtaagaagattgagaaattggcccgagatattctgatcgaccccattcgagttgtg
cagggagacattggagaggcaaatgaagatgttactcaaatcgtggagattttcccctct
ggccctagcaagtggaactggctgactcggcgcctcgtggagttcacatcgtctgggagt
gttctcctgtttgtcaccaagaaggcaaatgcagaagagctggccaataacctcaagcag
gaggatcataatctagggctgcttcatggtgacatggaccagagcgagaggaataaagtc
atttcagaatttaagaaaaaggggatcccgatactggtagctactgatgtggcagctcgt
gggttagatattccttccattaagactgttatcaattatgatgtggctcgggacatcgat
acacacacccatagaattggtcgtactggcagagctggtgagaagggagttgcctacact
ctgctgactcccaaagacagtaacttcgctggtgatcttgtcagaaacctggaaggcgct
aatcaacacgtttccaaagagctgttggatctagcaatgcagaatccgtggttccggaaa
tcacgtttcaaaggaggaaaaggcaaaaagctgaatattggtggtggtggcttaggatac
cgtgaacgtcctggtctgggatcagaaaattctgatcgtggaaacaacaacagtgtgatg
agtaactatgaggcgtacaagccatccactggggcgatgggagacaggcttacggcaatg
aaagcagcttttcagtcccagtataagagccattttgttgctgcaagcttaaacaatcaa
aagactggtagctcttctgctggtgcgagtggctggaccagcgctgggagcttaaactcg
gtaccaacgagttcagcacagcaaaacgctgcaaaccctgacagtcccatcgcagccgcc
gcagcagcgaagggtgttccgggtttcaccagcacggggaatttgagcagcgttcccacc
tttccaagcgtcggagtacagggcttcaacaacacaactgccagcaccaacaatcgcgaa
gccatcggcagcagcggccccggcgttgcggctggcggtggcggtggcgttgtcagagaa
cgatacaacgacaaccggaacagtcgccacaacgaggtcccgcgccgtggagagggtggc
gggcgctacaacgacgtgcagcgccacggagaaggaggcagtcgccacagtgacgcttac
cgccacggagagggccgacacggcgacggccatcgccacgctgagagccggcacttcccc
gacggcggcggcggccgcaataacggtgacagcaggaacagcagcgacggtaggaacaac
gagaacaggaatggtgagaacaggaaggatggcaacagccgagacaacaagacagatggg
tttgctgtcccagaacccccaaaacgtaagaagagccggtgggacagttaa
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