Athene noctua (little owl): 141971395
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Entry
141971395 CDS
T11550
Symbol
SNRNP200
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
anoc Athene noctua (little owl)
Pathway
anoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141971395 (SNRNP200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anoc03041
]
141971395 (SNRNP200)
Enzymes [BR:
anoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
141971395 (SNRNP200)
Spliceosome [BR:
anoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
141971395 (SNRNP200)
Complex C
U5 SnRNP specific factors
141971395 (SNRNP200)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141971395
NCBI-ProteinID:
XP_074784833
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Position
28:2338921..2365680
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AA seq
2136 aa
AA seq
DB search
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT
DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDIYGEVRDEASDDDMEGDEAVVRCTL
SANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFL
YQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFAQGS
HFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLVSVEKLPKYAQAGFEGFKT
LNRIQSKLYRAALESDENLLLCAPTGAGKTNVALMCMLREIGKHINIDGTINVDDFKIIY
IAPMRSLVQEMVGSFGKRLATYGINVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKG
GERTYTQLVRLVILDEIHLLHDDRGPVLESLVARAIRNIEMTQEDVRLVGLSATLPNYED
VATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDM
LNAETVLGNVQNAKDAVNWLGYTYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTA
ALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNETMQTYNQLLKPTLSEIELFRVFSL
SSEFRNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMAD
MVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFKKLPEEVV
KKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKV
ELTIAPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLVTFFVPVFE
PLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESL
YQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQNSEGRCVYIT
PMEALAEQVFLDWYEKFQERLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWK
QRKNVQNVNLFIVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDV
AHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAIMKHSPKKPVI
VFVPSRKQTRLTAINILTTCASDVQRQRFLHCAEKDLVPYLEKLNDNTLKETLVNGVGYL
HEGLTAMERRVVEQLFSSGAVQVMVASRSLCWGMNIAAHLVIIMDTQYYNGKIHAYVDYP
IYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGVSHRHLSDHLSELVEQTLSDLEQSK
CISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPI
RHHEDNLLRQLAQKVPHKLTNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAI
RLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVE
SVFDIMEMEDEDRNALLQLSDAQIADVARFCNRYPNIELSYEVVEKESIRSGGPVVVLVQ
LEREEEVTGPVIAPLFPQKREEGWWVVIGDSKSNSLISIKRLTLQQKAKVKLDFVAPATG
THNYTLYFMSDAYMGCDQEYKFSVDVKEAESDSDSD
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgaccgcgcggagcctgcagtacgagtacaaggcgaactccaacctcgtc
ctccaagccgaccgctcgctgatcgaccggacgcggcgggatgagccgacgggggaagtc
ctgtccttggtgggcaaactggaggggacccgcatgggggacaaggctcagagaaccaaa
ccccagatgcaggaagagagacgagccaagagaagaaagcgtgacgaggacaggcatgac
atcaacaagatgaagggttacaccctgctctccgagggcatcgacgagatggtgggcatc
atctacaaacccaaaaccaaggagacccgcgagacctacgaggtgttgctgagcttcatt
caggcggctcttggggaccagccacgtgacattctctgcggagctgccgacgaggtcctg
gcagtgctgaagaacgagaaactgcgcgataaggagaggaggaaggagatcgatctgctc
ctgggacagactgatgatacccgctaccacgtgctggtgaacctggggaagaagatcaca
gattacggcggagacaaggagatccagaacatggatgacaatattgatgaaacgtacggg
gtgaacgtgcagttcgagtctgatgaggaggaaggtgatgaggacatttatggtgaagtg
cgcgacgaggcgtctgatgatgacatggagggagatgaagccgtggtccgttgcaccctc
tcggccaaccttgtggcatcgggggagctgatgagttcaaagaagaaggatctgcatcct
cgagacatcgacgccttctggctccagcggcagctgagccgcttctatgacgatgccatt
gtttcccagaagaaggcggatgaagtgctggagatcttgaagactgcaagcgacgaccgg
gaatgtgagaaccagcttgttctgctcctgggctttaacaccttcgacttcattaaagtc
ctgcggcagcaccgcatgatgatcctgtactgcactttgctggccagtgcccaaagtgaa
gctgaaaaagaaagaataatggggaagatggaagcggatcctgagctgtcgaagttcttg
tatcagctgcacgagacagagaaggaggatctcatccgggaggaacgctctcgccgggag
cgtgttcgccagtcccggatggacactgacttggagaccatggatctggaccaaggagga
gaggcactggctccccggcaggtgctggacttggaggatctggtgtttgctcaaggtagt
cacttcatggccaacaagcgatgccagctccctgacggctccttccgcagacagcgcaag
ggctacgaggaggtgcatgtgcctgccctgaagccgaagccttttggctctgaagagcaa
ttggtttctgtggaaaagttacctaaatacgcccaggctggatttgaggggtttaaaaca
ctgaaccgtattcagagcaaactctaccgcgctgcgctggagtcggatgagaatttgctg
ctgtgtgcgcccacgggtgctgggaagacaaacgtggccctcatgtgcatgttacgagaa
atagggaaacacattaatatcgacggaaccatcaacgtggacgatttcaagattatctac
attgcccccatgaggtccttggtgcaggagatggtgggcagcttcgggaagcgcctggcg
acttacggcatcaacgtggctgagctgacgggggatcaccagctctgcaaggaggaaatc
agcgctacccagatcatcgtctgcaccccggagaagtgggacatcatcacccgcaaggga
ggagaacgcacctacacccagctggtgcggctggtcatcctggatgagatacacctactg
catgatgaccgaggacccgtcctggagtctctggtagccagagccatccgcaacatcgag
atgactcaggaggacgtgaggctcgttggcttgagtgccaccctccccaactacgaggac
gtggctacgttcctgagagtggacccggccaaaggcttgttctatttcgataacagcttc
cgaccggtgcccctagagcagacctatgtgggtattacagagaagaaagcaatcaaacgc
ttccagataatgaatgagatcgtttatgagaagattatggagcatgctggaaagaaccag
gtgctggtgttcgttcactccaggaaggagaccgggaagactgcccgggccatcagggac
atgtgcctggagaaagataccctgggcctcttcctgcgagagggctcggcctccaccgag
gtgctgaggaccgaagctgagcagtgcaagaacctggagctgaaggaccttcttccttac
ggcttcgccattcaccacgccgggatgacgcgagtggaccggacactggtggaggatctg
tttgctgacaagcacattcaggtgctggtctccacagccacgctggcctggggtgtgaac
ctccctgctcacaccgtcatcatcaaggggacgcaggtgtacagccccgagaagggacgc
tggaccgagctgggtgccctggacatcctgcagatgctggggcgtgccgggaggcctcag
tatgataccaaaggagaggggatcctcatcacatcccacggcgagctgcagtattacctg
tccctgctcaaccagcagctccccattgaaagtcagatggtgtcgaagctcccggacatg
ctgaatgcagagacagtgcttggcaacgtccagaatgcaaaggatgcagtgaattggctg
ggatacacctacctgtacatccgaatgctgcgctcccccactctctacgggatatcccat
gatgatctgaagggggatccgctgctggaccagcgccgcctggatctggttcacacggca
gccctcatgttggacaagaacaacctggtgaagtacgacaagaagacgggaaacttccag
gtcacagagctgggccgcatcgccagccactactacatcaccaatgagacgatgcagact
tacaatcagctcctcaaacccaccctgagtgaaatcgagttgtttcgggttttctcgctc
tcctcggagttcaggaacatcaccgtgagggaggaggagaagctcgagcttcagaagttg
ctggagcgagttcccatcccggtgaaggagagcatagaggagcccagtgccaagatcaat
gtgctcctccaggcctttatctcccagctgaagctggaaggatttgctctcatggcagac
atggtctatgttacccagtctgctgggcggctgatgcgagccatcttcgagatcgtcctg
aaccgtggctgggcccagctcaccgacaagacccttaacctctgcaagatgattgacaaa
cggatgtggcagtccatgtgccctttgcgccagttcaagaaactgcctgaggaagtggtg
aagaaaatcgagaagaagaatttcccgtttgaacggctctatgacttgaaccataacgaa
ataggggaactgatccgaatgcccaagatgggtaagacaatccacaaatacgttcatctg
tttccaaaactggagctttcggtccacttgcagcctattacccgctccaccctgaaagta
gagctcaccattgcccccgacttccagtgggatgaaaaggtacatggttcatctgaagct
ttctggatcctggtggaagatgtggacagcgaagtgatcctgcaccacgagtacttcctg
ctgaaagccaagtatgcgcaggacgagcacctcgtcaccttcttcgtgcccgtgtttgag
ccactgcccccacagtacttcatccgggtggtctctgaccgctggctctcctgtgagacc
cagctgcccgtttccttccgccacctgatcctccctgagaagtaccctcctccgaccgag
ctgctggatctgcagccgctgcccgtgtcggctctgcggaacagcgccttcgagagcctc
taccaggacaagttccctttcttcaaccctatccagacgcaggtgtttaacactgtttat
aacagtgacgacaacgtgtttgtgggtgcccccacgggaagcggaaagaccatttgtgct
gaatttgccatcctgaggatgctgctgcagaactcggagggacgctgcgtgtacatcact
cccatggaggctctggcagagcaggtcttcttggactggtatgaaaaattccaggagcgt
ctcaataagaaggtcgttttgctgacgggggagaccagcactgacctgaagttactgggc
aaaggcaacatcatcatcagcacccccgagaaatgggacatcctctcgcgacgctggaag
cagcgaaaaaacgtccagaatgtcaacctcttcatcgtggatgaagtgcatctcattggg
ggcgaaaatgggccggtgctggaggtcatctgctcccgcatgcgctacatctcctcccag
atcgagcgccccatccgcatcgtggccctgagctcgtccctgtccaacgccaaggacgtg
gctcactggctgggctgcagtgccacctccaccttcaacttccaccccaacgtccgcccc
gtgccgctggagctgcacatccagggcttcaacatcagccacacgcagactcgcctgctc
tccatggccaagcctgtctaccacgccatcatgaagcactcgcccaaaaagccggtcatc
gtcttcgtcccctcccgcaagcagacgcggctcacggccatcaacatcctcaccacgtgc
gcttcagatgtccagaggcaaaggttcctgcactgtgcagagaaggatctggtaccgtac
ctggagaagctgaacgacaacactctcaaggagacgctggtgaacggggtgggctacctg
cacgaggggctgaccgccatggaacggcgcgtggtggagcagcttttcagctccggtgcc
gttcaggtgatggttgcctcccgcagcctctgctggggtatgaacatcgccgctcacctg
gtgatcatcatggacacgcagtactacaacggcaagatccatgcgtacgtggattacccc
atctacgacgtgctgcagatggtgggccacgctaatcgcccgctgcaggacgacgagggc
cgttgtgtcatcatgtgccagggatccaagaaggatttcttcaagaaattcctctacgag
cctctgccagtggagtcacacttggaccactgtatgcacgatcacttcaacgccgagatt
gtcaccaagaccatcgagaacaagcaggatgcagtggactacctcacttggacgttcctg
tatcgcaggatgacgcagaatccaaactactacaacctacaaggtgtgtcccacaggcat
ctctcggatcatctctccgagctggtggaacagaccctcagtgacctggagcagtccaag
tgcatcagcattgaggatgagatggacgtggctcctctgaacctggggatgattgctgcc
tactactacatcaactacaccaccatcgagctcttcagcatgtccctcaatgccaagacc
aaggtgcgagggctgattgaaatcatctccaacgctgctgagtatgagaacatccccatc
aggcaccacgaggacaatctcctgcggcagctggcccaaaaagttccccacaagctgacc
aaccccaaattcaacgatccccacgtcaagaccaacctcctgctgcaggctcacttgtca
cgcatgcagctgagcgccgagctgcagtcggacaccgaggaaatcctcagcaaggcaatc
cggctcatccaggcctgtgtggacgttctgtccagcaatggctggctcagccccgcgctg
gctgccatggagctggcacagatggtgactcaggccatgtggtccaaggattcctacctc
aagcagctgcctcatttcacctctgagcacatcaagcgttgcacagacaagggggtggag
agcgtctttgacatcatggagatggaggacgaggaccgaaacgctctgctgcagctctcg
gacgcccagattgctgatgtcgctcggttctgtaaccgttatcccaacatcgagctctcc
tacgaggtggtggagaaggagagtatccgcagcgggggacctgtggtggtgctggtgcag
ctggagcgtgaggaggaggtcaccgggcctgtcatcgctccccttttcccgcagaaacgt
gaggagggttggtgggtggtgatcggtgactccaaatccaacagcctcatctccatcaag
cgcctgacactgcagcagaaagccaaggtgaaactggatttcgtggccccggctacaggg
acacacaactacacgttgtatttcatgagtgatgcctacatgggctgcgaccaggagtac
aagttcagcgtcgatgtgaaggaggcagaaagtgacagcgactccgactaa
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integrated database retrieval system
