KEGG   Athene noctua (little owl): 141971471
Entry
141971471         CDS       T11550                                 
Symbol
SMG5
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5 isoform X1
  KO
K11125  protein SMG5
Organism
anoc  Athene noctua (little owl)
Pathway
anoc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:anoc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    141971471 (SMG5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:anoc03019]
    141971471 (SMG5)
   03032 DNA replication proteins [BR:anoc03032]
    141971471 (SMG5)
Messenger RNA biogenesis [BR:anoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     141971471 (SMG5)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     141971471 (SMG5)
DNA replication proteins [BR:anoc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (animals)
    141971471 (SMG5)
SSDB
Motif
Pfam: EST1_DNA_bind EST1 PIN_4
Other DBs
NCBI-GeneID: 141971471
NCBI-ProteinID: XP_074784920
LinkDB
Position
29:join(1884453..1884529,1891000..1891098,1891733..1891856,1892514..1892670,1895629..1895718,1897031..1897120,1897997..1898075,1898650..1898775,1899224..1899292,1901223..1901431,1901573..1901710,1902803..1903504,1905347..1905516,1905777..1905852,1906527..1906702,1907794..1907952,1908172..1908231,1909174..1909333,1910275..1910365,1910972..1911046,1911368..1911506,1912624..1912707)
AA seq 1049 aa
MSQGGGATGESGEPEAKVLHTKRLYRAVVEAVHRLDLILGNKAAYQEVFKPENISLRNKL
RELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGI
GFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLG
DLARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCI
QSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRGKDIKRLLVSFMYLQSLLQ
PKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPNLSSTSEDEEEYESGYSFLPDLLIFRMV
IICLMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDGTD
DQEPREPLNSIEKEAEADLANRQPSEEQRKNDCKKSKKYSRLSCLRRRRHPQKVDESDLS
EGFDSDSSQGSIKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEE
GSGRGKSGPKEALKNCVDGSGLGDSKSPSISKTEAPDPAVNGPASLSTNDASIASNLQAM
STQLFQTKRCFRLAPTFSNILLKPNSESTILKDGIESKPCVNGDLEKPSLAEQDDVSDSE
ESISSSKSCRNERSLQEKLEIVTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLS
VLLNLLPSAADLQESGLALCNEVKDILSGAELPDLKANLLLPEDVALRNLPPLKNAHKRF
NFEQDRPIFSAVEESVVRICCIRSFGHFITHLQGSILQFNSELGIFISIAQSEQDNLLHQ
AQAQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQH
LAVVKQLATSGRFIIIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVG
KSFERHKLKRQDLDAWNLYKILDSCKQLTVSQGSGEDDTTGMVTIITGFQLEDPSTFSAP
MQSAIQAAANASVEIKNVLEFYKQWKEMG
NT seq 3150 nt   +upstreamnt  +downstreamnt
atgagccagggcggcggggccaccggcgagagcggcgagccggaggccaaggtgctgcac
actaagcggctgtaccgagccgtggtagaggctgttcaccgtctggatctcatccttggt
aataaagcagcgtatcaagaggtgttcaagccagaaaacatcagcttgagaaacaagctg
cgggagctgtgtgtgaagctgatgttcttgcatccagtggattatggaagaaaagcagaa
gaactgctctggagaaaagtttactatgaagttatccagctcattaaaacaaataaaaag
cacattcacagccggagcactctggagtgtgcgtaccgcactcacttagttgctggcata
ggattttaccagcaccttctcctctacatccagtctcactatcagctggagctgcagtgt
tgcattgactggacacatgtgacagaccctctcataggctgcaagaaacctgtgtctgca
tcggagaaggagatggagtgggcacagatggcatgtcacagatgtctggtttatctggga
gatctagctcgctatcagaatgaactggcaggtgtggacacagagttactggctgagcgg
ttttactatcaagccctttctgttgcaccacaaattggcatgccctttaaccaactgggg
acactggcagggagcaaatactacaatgtggaagctacctattgctacttacgctgtatc
cagtctgaagtgtcctttgaaggtgcctatgggaacctgaagcggctgtatgacaaagca
gccaaaatgtatcaccagttgaagaaatgtgaaaccaggaagctgtctccaagcaagaaa
cgaggcaaagacattaagaggttgctggtgagctttatgtacctgcagagtcttttgcag
ccaaagagcagctctctggattctgagctgacatctctgtgccagtctgtgctggaggat
ttcaacctgtgcttgttctacttgccttctcctcctaatctgagctcaactagtgaagat
gaagaagagtatgagagtggctactccttcctgcctgatctcctgatctttcgcatggtg
atcatctgccttatgagcgttcacagcctcaagagagcaggttcaaagcagtacagtgca
gccatcgctttcacactggccctcttctctcacctgataaatcacgtcaatattcgcctg
caggcagagctagaagaaggggaaaatccagtcccagcctttcagagtgatggcacagat
gaccaggaaccacgagagccgttgaactcgattgagaaggaagctgaagctgacttggcc
aatcgtcagcccagcgaggaacagcggaagaatgactgcaagaaaagcaagaaatactct
cgcctctcctgtctgcgccgccgccgtcacccgcagaaggtggatgagagtgacctgagt
gagggctttgactctgactccagtcagggctccataaagggcagcgatggctcagaaagt
ggctcagagaagagcgacgaggaagcagaagctgcttttgatgtggagacggactctgac
atgaacagccaagaatctcggtccgacttggaggatatggaggacgagccaggtgaggag
ggaagcggccgaggcaaaagcgggcccaaagaggccttaaaaaactgtgtagatggcagt
ggcctgggggactccaagagcccaagcatctctaaaactgaggctccagatccagcagtg
aatgggccagcttccctgagcactaatgacgcaagcatagccagtaatctccaggccatg
tccacccagctctttcagacgaaacgctgctttcgcttggctcctactttcagcaacatc
cttctgaaaccgaacagcgaatcgaccatcttgaaggatggaatagaaagcaagccttgt
gtcaacggagatctggagaagcccagcttggcagagcaagatgatgtgtctgactctgag
gaaagcatttcaagtagcaaatcctgcaggaatgagcgatcccttcaggagaaactagag
atcgtcaccaatgaagggctgctgctcactgtcaaggtgttcctggactggctgaggaca
aacacggacctcatcatcatgtgtgctcagagctctcagagcctgtggaacaggctgtct
gtgctcctgaaccttctgccttctgctgcagacctgcaggaatcagggctggccctgtgt
aatgaagtcaaggacatcctgagcggtgctgagctcccagacctcaaagccaacttgctg
ctcccagaagatgtggccctgcggaatcttccccctctgaaaaatgcacacaagaggttt
aactttgagcaggaccggcccattttctcagctgttgaggagtctgttgttcggatttgc
tgcattcggagctttggccacttcattacccacttgcaaggcagcatcctgcagttcaac
tcggagcttgggatcttcatcagcatagcacagtcggagcaagacaatttgctgcaccag
gcacaagcccagtttcacatggctgcagaagaagctcgtcggaacaggctaatgagagat
atggctcagcttcgactgcagctggaggtttctcagctggagggaagtctccagcagccc
aaagcacagtcagccatgtctccgtacctcgtcccggacacccaggccctctgccagcac
ctggctgttgtcaagcagctggcaaccagcgggagattcataatcatcatcccccgaaca
gtgattgatggcttagacttcctgaaaaaggagaacgcaggtgcgcgggacagcatccga
tatctggaggcagaatttaaaaagggaaacaggtacattcgttgccagaaagatgttggg
aagagcttcgagaggcataaattgaagagacaagatttagatgcctggaatctctataaa
atactggacagctgcaaacaactgacagtgtcccagggaagtggagaggacgacaccaca
ggaatggtcaccatcatcacgggctttcagctggaggacccaagcacgttctcggcgccc
atgcagtctgccatccaggcagccgccaatgccagtgtagaaataaaaaatgttctggag
ttctacaagcagtggaaagagatgggctga

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