Athene noctua (little owl): 141972580
Help
Entry
141972580 CDS
T11550
Symbol
COL11A2
Name
(RefSeq) collagen alpha-2(XI) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
anoc Athene noctua (little owl)
Pathway
anoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
anoc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141972580 (COL11A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
anoc00536
]
141972580 (COL11A2)
Glycosaminoglycan binding proteins [BR:
anoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141972580 (COL11A2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
141972580
NCBI-ProteinID:
XP_074786575
LinkDB
All DBs
Position
34:complement(1183350..1211515)
Genome browser
AA seq
1748 aa
AA seq
DB search
MAPRRPAPPLALLGLGLAIAMAPPAAAASGAPVDVLKILRLHSLPEGVQRAPGFCSHHGA
GSDSAYRVTRQAQLSAPTRQLFAGPFPADFSIMTLVKADRGLRAFLLSIYNQDGVQQLGL
ELGRSPLFLYADQDGRPPPEDYPLFRGVDLADGKWHRVALSVSRRSVTLVVDCHRRVTKA
LPRGARPHIDTRGVTVFGTGILDQEVFQGDIQQLLIADDPQAAFDYCPRHGPTCLATAPQ
AQEPPRHPEYSEEAVEYYEYPYYYSNSEDGPPPGGVPEKDGGLPPPTEETWGATVYPDYA
PGPPRPPEGASWEEMGPAQEEEEGGPSRAYEYVYTEHPESLGAVRGVRGYKGEKGEPAVL
EPGMLVEGPPGPEGPAGMSGPPGTQGPPGAPGEPGERGPPGRAGLPGSDGTPGPPGTSMM
LPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPMGQPGSTGMKG
ESGDFGPQGPRGPQGLTGPPGKPGRRGRPGADGARGMPGDPGVKGDRGFDGLPGLPGDKG
HRGESGSQGMPGPPGEDGERGDDGEVGPRGLPGEAGPRGLLGPKGPPGIPGPPGVRGMDG
PIGPKGNLGPQGEPGPPGQQGTPGTQGLPGPQGATGPPGEKGPQGKPGLPGMPGSDGPPG
HPGKEGPPGTKGNQGPSGPQGPIGYPGPRGVKGVDGIRGLKGHKGEKGEEGFPGFKGDMG
VKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPIGLVGEKGKLGVPGLPGYPGRQGPKG
SQGFPGFPGSNGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGSDGPHG
PPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQG
AAGESGPMGERGHPGPPGPPGEQGLPGPSGKEGTKGDPGPTGSPGKDGPAGLRGFPGERG
LPGTPGGPGLKGNEGPAGPPGPAGSPGERGGPGQGGPVGPPGRPGPQGPPGPAGEKGVPG
EKGPMGPAGRDGVQGPVGLPGPAGPPGGPGEDGDKGEVGEPGQKGSKGNKGEHGPPGPPG
PIGSVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPAGEKGETG
DVGPMGPPGPPGPRGPAGPSGADGPQGPPGGVGNLGPPGEKGDPGESGAPGIQGEPGVKG
PRGERGEKGEAGAAGAAGPPGGKGPPGDDGPKGNPGPVGFPGDPGPPGEMGPRGQDGAKG
ERGEDGEPGEPGSPGPTGENGPPGPLGKRGPAGSPGPEGRQGEKGAKGEPGAVGAPGKTG
PVGPQGLAGKQGPDGLRGLPGSVGEQGKPGTTGQAGPPGPVGPPGLPGLKGDTGAKGEKG
HPGLIGLIGPPGEQGEKGDRGLPGPQGSTGQKGETGIPGATGPIGPAGPPGLPGPAGPKG
AKGAMGQAGPKGERGPPGPPGHPGPPGEVIQPLPIQLPKKSKRSIDGSKLVEEEEEEGEE
ERAAADQAARDYAEGMEEIFGSLNSLKQEIEGLRRPMGTRDNPARTCQDLQLSHPGLPDG
EYWIDPNQGCARDSFKVYCNFTAGGETCVFPSKDVQEVKMAAWEEEEEVPQRWFSQFQEG
SRFSYTDAESQALGVVQLTFLRLLSVSARQNFTYRCHRSVGWHSAVSGDHRRALRFLAAN
EEELSYDTSPYIKAVADGCAARKGPGRTVLEVSTPRLEQLPLLDVRVMDFGEPGQRFGFE
VGPVCFLG
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atggccccgcgccgccccgcgccgccgctcgccctgctcgggctcgggctcgccatcgcc
atggccccgcccgcggccgccgcctcaggagcccccgtggacgtgctgaagatcctccgg
ctccactccctgcccgaaggcgtccagagagcgccggggttctgctcccaccacggcgcc
ggctccgacagcgcctacagggtcacgcgccaggcccagctcagcgcccccacccgccag
ctcttcgcgggtccgttcccggcggatttttccatcatgacgttggtcaaagccgaccgc
ggccttcgagcgttcctcctctccatctacaaccaagatggcgtccaacagctgggcctc
gagctgggccgctcgcccctcttcctctacgccgaccaagatggccgcccgccccccgag
gactatcccctcttccgcggcgtggatttagccgacggcaagtggcaccgggtggccctg
agcgtcagccgccgctcggtgacgctggtggtggattgtcaccggcgggtgacaaaggcc
cttccccggggggcgcggccccacatcgacacccgcggcgtcaccgtcttcggcaccggg
attctggaccaggaagtgttccagggtgacatccagcagctcctcatcgccgacgacccc
caggccgccttcgactactgcccccgccacgggcccacctgcctggccacggccccccag
gcgcaggagcccccccgccacccagagtactccgaggaggctgtggagtactacgagtac
ccctactactacagtaatagcgaggacgggccccccccggggggggtccccgaaaaggat
ggggggctgcccccccccacggaagaaacttggggggccaccgtgtacccggattatgcc
ccgggccccccccgaccccccgaaggtgcctcctgggaggagatggggccggcacaggag
gaggaggagggggggcccagccgggcgtacgagtacgtctatacggagcaccccgagtcg
ctgggcgctgtgcgcggcgtcaggggctacaagggcgagaagggtgaacccgccgtcctc
gaaccgggcatgttggtggagggtccccccggccctgagggacccgcgggcatgtcggga
cccccagggacacagggacccccgggagcccccggagaacccggcgagaggggccccccc
ggccgcgccggcctccccggttccgacgggacccccggaccccccggcacctccatgatg
ctgccgttccgcttcgggagcggcggcggcgacaaggggccggtggtggcggcgcaagag
gcgcaggctcaggccatcctgcagcaagcccggctggccctgaggggcccccccggaccc
atgggctacaccggccgccctggacccatggggcaacctggcagcaccggcatgaagggg
gagtccggagacttcggccctcagggtccccgaggtccccagggcctcacgggcccccca
ggaaagcctggccggaggggccgcccaggagctgacggcgcgcgggggatgcccggtgat
cccggtgttaagggtgaccgcggcttcgacgggctaccggggctaccgggtgacaaaggc
caccggggtgaaagcggctcgcaggggatgccgggcccccccggggaggatggtgagagg
ggtgacgacggagaggtgggacctcgaggactccccggagaagcgggacccagaggtctg
ctcggccccaagggccccccaggaatccctggcccccccggtgtgcgcggcatggacggc
cccatcggtcccaaggggaacctggggcctcaaggggagcccggaccccccggccaacag
gggaccccaggaacccaggggctcccgggaccccaaggcgccacgggaccccctggagag
aagggtccccaaggaaaacctggcttgcccggcatgcccggctccgacggcccccccggt
caccccggcaaggagggaccccccggcaccaaaggcaaccagggtccctcaggtccccaa
ggccccatcggttacccaggcccgcgcggtgtcaagggtgtagacggcatccgggggctg
aaaggacacaagggtgagaagggtgaggaaggattccccggcttcaagggggacatgggt
gtcaaaggagaccggggtgaggtgggagtgccgggctcccgcggcgaggacggacccgaa
ggtcccaagggacggacgggacccaccggtgaccccggccccatcgggttggtcggagag
aagggaaaactgggagttccaggcctgcccggctacccggggcgtcaaggtcccaaggga
tctcagggtttccccggattcccgggcagcaacggcgagaaaggcgccaggggtctgtcg
ggcaaatcggggcccaggggcgagcgtggccccacgggtcccaggggccagcggggacca
cgaggagccaccggcaagtcaggggcgaagggcacatcgggcagcgacggcccccacggc
cccccaggagaacggggcctaccaggaccgcagggacccaacggcttcccaggacccaaa
ggaccccctggaccccccggcaaggacgggctccccgggcaccccggccagcgaggagaa
gttggttttcaaggcaaaaccggcccccccggcccccccggggtggtgggacctcaggga
gccgctggcgagtcaggccccatgggggagaggggccacccgggcccccccggccccccc
ggcgaacaagggctaccgggaccatcgggcaaggagggcactaagggggaccccggcccc
accggctcccccgggaaggacggtcccgccggtttgcgggggttccccggggagcggggt
ctgcccggcaccccgggcggcccagggctgaagggcaacgagggcccagcgggacccccg
ggacccgcagggtcccctggagagagaggtggcccaggacaagggggtcccgttggcccc
ccaggacgaccgggcccacagggcccaccaggtccggctggagagaaaggagttcccggt
gaaaaaggccccatgggtcccgctggccgcgatggcgtgcagggccctgtggggttaccg
ggccctgccggcccccccggtggccctggggaggacggggacaagggtgaagtgggcgaa
ccgggacaaaaaggcagcaaaggcaacaagggcgagcacggtcctcccggcccccccggg
cccatcgggtcggtcgggcaacctggagccgccggcgctgacggggaaccgggtgccaga
ggtccccaaggacactttggggccaaaggtgacgaggggacaaggggcttcaacggcccc
cccgggcccatcgggctccagggtttaccgggtccggctggtgaaaaaggtgaaacgggt
gatgtgggccccatgggcccacccggccccccaggcccccggggcccagctggaccctct
ggagctgacggaccccaaggaccccccggaggtgttggcaacctgggacctcctggagag
aagggggaccccggtgaatcgggggccccgggaatccagggggaaccaggagtcaagggc
ccccggggcgagcgaggggagaagggagaagccggagctgcgggtgctgccggcccaccc
gggggcaaaggcccccccggggacgacgggcccaagggcaaccccggtcccgtcggtttt
ccgggcgatcccggccccccaggtgaaatgggccccaggggccaggatggtgccaagggc
gagcgcggtgaggacggcgaacccggcgaaccgggctcgccgggcccgacgggtgagaac
ggtcctcccggtcccctggggaagaggggcccagccggttctcccggccccgaggggcgt
cagggcgagaagggcgccaagggagaaccgggcgccgtgggtgctcccgggaaaacgggt
cccgtgggtccccaaggccttgctgggaaacagggccccgacggtctcagaggtctgccc
ggctcggtgggagaacaaggcaaaccggggaccacaggccaggctgggccaccgggacca
gtgggtcccccgggtctccccggcctcaaaggtgacaccggtgccaaaggagagaagggt
caccctgggctcatcggcctgatcggaccccccggggagcagggggagaagggggaccgg
gggctccccggcccccagggctccacggggcagaagggagaaactgggatccctggtgct
accggacccatcggccccgctggcccccccggacttcccggcccggcgggtcccaaaggt
gccaagggagccatgggccaagcaggacccaaaggtgaacgcggacccccgggacccccc
ggacacccgggcccccccggggaggtgatccagcccctgccgatccagctgcccaagaag
agcaaacgctccatcgacggcagcaagctggtggaggaagaggaggaggagggagaggaa
gagcgagcggccgccgaccaggcggctcgtgactacgccgagggcatggaggagattttc
ggctccctcaactccctcaaacaggagatcgagggcttgcggcgccccatgggcacccgg
gataatcctgcccgcacctgccaggacctgcagctcagtcacccggggctgcccgacggc
gagtattggattgaccccaaccagggctgcgcccgagattctttcaaggtttattgcaac
ttcacagcgggtggggaaacctgtgtctttcccagcaaggatgtacaggaggtgaagatg
gcggcctgggaggaggaggaggaggtgcctcagcgctggttcagtcagttccaggagggc
agcaggttttcctacacggacgcggagagccaagccctcggcgtggtgcagttgaccttc
ctccggctcctcagcgtttccgcccggcagaatttcacctaccgctgtcaccgctcggtg
ggttggcacagcgccgtctccggggaccaccgccgtgccctccgcttcctggcggccaac
gaggaggagctcagctacgacaccagcccctacatcaaagccgtggccgacggctgcgcg
gcacggaaaggccccggccggacggtgctggaggtgagcacaccccgcctggagcagctc
ccgctgctggacgtgcgcgtcatggacttcggcgaacccggccagaggttcgggttcgag
gtgggcccagtctgtttcctgggctag
DBGET
integrated database retrieval system
