KEGG   Athene noctua (little owl): 141974016
Entry
141974016         CDS       T11550                                 
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
  KO
K12600  superkiller protein 3
Organism
anoc  Athene noctua (little owl)
Pathway
anoc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:anoc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    141974016 (SKIC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:anoc03019]
    141974016 (SKIC3)
Messenger RNA biogenesis [BR:anoc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     141974016 (SKIC3)
SSDB
Motif
Pfam: TPR_19 TPR_1 TPR_2 TPR_14 TPR_16 TPR_12 TPR_11 TPR_17 TPR_8 TPR_CcmH_CycH ANAPC3 TPR_9 ARM_TT21_C TPR_15 TPR-S Fis1_TPR_C Retrotran_gag_2 HAT_Syf1_M Vit_open_b-sht TolB_N
Other DBs
NCBI-GeneID: 141974016
NCBI-ProteinID: XP_074789347
LinkDB
Position
Z:complement(join(90102160..90102237,90103772..90103895,90105555..90105685,90107455..90107607,90110332..90110490,90112298..90112419,90113038..90113166,90114300..90114411,90114524..90114577,90115309..90115381,90116203..90116421,90118706..90118829,90119669..90119793,90121037..90121114,90121689..90121782,90122977..90123118,90123746..90123820,90124204..90124272,90125377..90125433,90125557..90125618,90125737..90125815,90125984..90126128,90127068..90127244,90128061..90128163,90131057..90131310,90131759..90131883,90132692..90132871,90134043..90134169,90134283..90134386,90134476..90134562,90135206..90135339,90139316..90139417,90141122..90141262,90143065..90143173,90143270..90143368,90146084..90146224,90147331..90147406,90148063..90148154,90149192..90149335,90149839..90149928))
AA seq 1562 aa
MSNKEVKTALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLSAAELEQPDQSK
GAYKKAIEIEPNQLLAWQGLANLYEKSNQTDVKGDLADVYKKLLELYESGDKQKWFDVCN
KLVELYHQEKKYLEVAETWQKLIQMKQEEGAEKAELHQLWKKMTQLLKDSPQNQDNKTAQ
LLLTAFEHAVNSADTDPSEDHQNLYKDFIQCLSKFPHETAKLKRACDDMMALYPTVSYPL
EVLCLHHVQSGTLSEEALHCFSRLLEMDASSGPGIIGFGLKCFQEKKYKEAIESLTEGLK
KTSQCPAAWHYLAEAQRKIHRYRDAVLTCNQALEVLGIPEGPSLRWKNLILQLKAEALIK
IGDADAAEEAIKALEQIVDASSDPVVLAIRGQAYLIKGLMDQASEISQELLLSHPDLAQS
HALEGFIHYFQKNYEQAERSFLNAIERRAETAEYHQYLGLTYWFMSDETKKDKGKAVTQF
LKAAKLDSYLGSVFRYLGNYYQDIAGDKSRACGCYKKAFELDGTDEESGTAAVDLSVELG
DTDTALSILNEVTGKARVGTAKWAWLHRGLYYLRTGQPSQAVADLQAALRADAKDSNCWE
SLGEAYLSRGSYSTALKSFRKASELNPELVYSIYKAAAVEQILGKYNNAIATYQQILKKA
EDYVPALKGLGECHLMLARSALDNFLDRKAVDYIEQALEFFARAAKHRPDVSCLWKLLGD
TCTSVHVISPAKVNVQVLGSLMGKNEGKQMLKKSEMLRLGERCYGTALKLMPLPSIWCDL
GINYYRQAEHLTAAGTDVNETSELLAKSLQCLKKAVRLDSRNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLATGNIEQAHEAFKIAQSLEPSYLLCWIGQA
LIAETVGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKSNRNTELYQYNIVQMNAI
PAAQVVLSKYTERNPDDASAFTMLGYLNEYLHLKRQAADAYERAASLLKNSEDTEKYNTA
MQNYGRSLCALGQCDKAIEVYRSIPLTEFDGIVGIALAYFKKGLLQESIKAYEKALSVAE
SEQDKAHILTALAIIEYKQNKLDAAKALLFKCSLKEPSTESLTALCTLGLIKQDATLATA
ALKELLKHEKGHDRIYERCLIASAVYALQGRNVGVQREVSRAIHSNPDNPALWSLLSRLV
PLYASQKAKGGAVAGNIAHALDVNHSKEVLLNIAVNQLAAGCHMLEDEKNNPLKNIQKAI
RLCPDNPAAWAVLMAACHAENTVVCLNDTQPKRTDLEMTLVSTVSAKTGGNNLPHNYIQT
LEDWCLCQAITSLEESGKLSEAEALCTKGLQSRPEHPALFLLLRQVQCKQLLQSHKELPD
NILEELHKTVMTSSTSVAAWQWLAKVYQSQRMMIGAEMCYRKSLQLASQQGSWNGKFSSL
LRLAMLALEICMANVSNEHWPSLVQEATTEALKLSFCPLAALLQALLQYNRKMGARETRR
MLERVVYQPGNPETVVSVARWYLLRHLYAKDDYELIDVLIENAKANGDVRALQLNETLSS
SA
NT seq 4689 nt   +upstreamnt  +downstreamnt
atgtcaaataaggaggtgaaaacagcattgaagagtgctagagatgcaatacgaaataaa
gaatataaggaagccttaaaacattgcaaggcagtgttgaagcaagaaaaaaataactac
aatgcttgggtatttattggcctgtcagctgctgagttagagcagcctgatcagtccaaa
ggagcatataagaaagctattgaaattgaaccaaaccagttactggcatggcagggatta
gcaaatttatatgagaaatccaaccaaacagatgtcaaaggagacttggcagatgtttac
aaaaagctcttggaactctatgaaagtggtgacaagcagaaatggtttgatgtatgtaac
aagcttgtggaactatatcatcaagaaaagaaatatttagaggtcgctgaaacatggcag
aaactaatacagatgaaacaggaggaaggtgcagaaaaggccgagcttcaccagctttgg
aagaagatgacccagttactgaaagacagtccccagaaccaggataataagactgcacag
ctgcttttgactgcttttgaacatgcggtgaactctgctgacactgatcccagtgaagac
catcaaaatctttacaaggactttattcagtgcttgtcaaaatttcctcatgaaacggct
aagttgaaaagggcctgtgacgatatgatggctttgtatcctactgtgagttatccttta
gaagtactttgcttgcaccatgttcagtcaggtactttgtcggaagaggccctgcactgt
ttttctaggcttttagagatggatgcaagtagtggcccaggcatcattggttttggtcta
aagtgcttccaagaaaagaaatacaaggaggctattgagagtcttactgaaggtttgaag
aagactagccagtgtccggcagcatggcattatttggcagaggcacagaggaaaattcac
agatacagggatgctgtcctgacctgcaatcaagctcttgaggttcttggaatacctgag
ggtcctagtcttcggtggaagaaccttatccttcagttgaaagcagaggctttgattaaa
attggtgatgctgatgctgcagaagaagccattaaagcacttgagcagattgtggatgca
agcagcgatccagtggttttagctatcagaggtcaggcttatctaatcaaaggtttaatg
gaccaagcctcagagatttcacaagagcttctgttgtcccaccctgatctggctcagtcc
catgctctagaaggtttcatccattatttccaaaagaactatgaacaggcagaaagaagt
tttctaaatgctattgaaagacgggctgaaactgcagagtatcatcagtacctggggctc
acatactggttcatgagtgatgagacaaaaaaagacaaaggaaaagcagtcactcagttc
ttgaaggctgcaaaattggacagctacttgggaagtgtctttcgttatttaggtaactac
taccaagacattgctggagacaaaagtagagcttgtggttgctataaaaaggcttttgaa
ctggatggaaccgatgaagagtctggaacagcagctgtagacttaagtgtggaacttgga
gacacggacactgctctgtcaatcctgaatgaggtaaccggaaaagcgcgtgttggtaca
gcaaaatgggcctggcttcaccgaggactttactacctgagaactggccagccgtcgcaa
gcagtggctgatttgcaggcagctctcagggctgatgcaaaggattccaactgctgggag
tctctaggggaggcttacttgagcagaggtagctactcaacagcactgaaatccttcagg
aaagcaagcgagctgaacccagagctcgtgtacagcatttacaaagctgcagcagttgag
cagattctaggcaaatacaacaatgctatagctacctaccaacaaatcttaaagaaggca
gaagactatgtgcctgcactgaaaggacttggtgagtgccatctcatgctggcaagatca
gcccttgataactttctcgataggaaggctgtggattacatagagcaggctcttgaattt
tttgctagggcagcaaagcaccgtcctgatgtatcttgcctctggaaactgttgggagac
acctgtaccagtgtgcatgttatttcaccagccaaagtgaatgttcaagttctaggatct
ctaatgggtaaaaatgaaggcaaacagatgctgaagaaaagtgagatgctcagactggga
gaaaggtgttacggcacagctttaaaattgatgcctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagaacacctcacagcagcgggcactgacgtgaatgag
accagtgaactgctagcaaagtctttgcagtgtctcaaaaaagctgtgaggcttgacagc
agaaatcatctttattggaatgcacttggtgtggttgcttcctgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaatcaatgttgtt
gcctggaccaacttgggggttttgtatctggcaactggaaacattgagcaagctcatgaa
gccttcaagatagcccagtctctggagccttcttacctgctgtgttggattgggcaggca
cttattgcagagacggtaggcagctatgatactatggatctcttcaggcacacaactgaa
ctcagtatgcatactgagggagcaaaaggctatgcccactgggtgtgttcaacgctgcag
gataaaagcaacagaaacactgaactatatcagtacaacattgttcagatgaatgctatt
ccagcagcccaggtggtcctgagcaaatacacagaaagaaatccagacgatgcatctgct
ttcacaatgcttggttatttgaatgaatatctgcatctaaaaaggcaggcagcagatgcc
tatgagagggctgcttcattgctgaaaaactctgaggatactgagaaatacaatacagca
atgcaaaactatggcaggtcactgtgtgcccttggtcagtgtgataaggccattgaggtt
tacagatcaatacccctaactgagtttgatggcattgtggggatagcattagcctacttc
aagaaaggactcctacaagaaagtatcaaagcatatgaaaaagccttgtccgttgctgag
tctgaacaagataaagcacatatcctgactgccttggcaataatagagtataaacagaac
aaacttgatgctgcaaaggcgctgctgtttaaatgctcattaaaggaacctagtacggaa
agtctgacagctttgtgcacgctaggactgataaagcaggatgccacacttgcaacagca
gccttaaaagaattactgaagcatgaaaaagggcatgacaggatttatgagaggtgcctt
attgcatctgctgtttatgcattgcaaggtagaaatgtgggggtccagagagaagtctcc
agagcaatacacagtaaccctgataatcctgccctctggtctcttctgtctcgactggtt
ccactctatgcatcacaaaaggcaaaagggggagctgtggcaggaaacatcgcacatgca
cttgatgtaaaccacagcaaggaagtcctgctgaacattgcagttaatcagttggcagca
ggttgtcacatgttagaagatgagaaaaacaatcctctgaaaaatattcagaaggcaatc
cgcctctgtccagataatcctgctgcctgggcagtgctaatggcagcctgtcatgctgaa
aacactgttgtctgtctcaacgacactcagccgaagcgaacagatctagagatgacactt
gtatctacagtttcagccaaaactggaggaaacaaccttccacataattatatccagacc
cttgaagactggtgtctgtgtcaagctattaccagtctagaggagagtggtaaactctca
gaagccgaggctctttgtaccaagggtttacaaagccgccctgagcacccagctctgttt
ttgcttttgagacaagttcagtgtaagcagctgttgcagtctcacaaagaacttccagac
aacatcctggaggagcttcacaagacagtcatgaccagttcaacttcagtcgcagcctgg
caatggctggcaaaagtgtatcagtctcaaagaatgatgattggagcagagatgtgttac
aggaagagtctgcagttggcgtcacagcagggcagctggaatgggaagttttccagtctg
ctcaggctggctatgctcgcactggagatctgcatggctaatgtctcaaatgagcactgg
ccatccttggttcaggaagccacaactgaagctttgaaactttctttttgccccctggca
gctctcctacaagcactgctccagtataatcgcaaaatgggagcaagggagactcgtcgg
atgttggaaagagtggtttatcaaccagggaatccagaaaccgtagtgtcagtggcgcgc
tggtacctcctgcgacatctgtatgccaaagatgattatgaattaatagatgtacttata
gaaaatgccaaagctaatggagatgttagagctctgcagctaaatgagacattgtcatca
agtgcctag

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