KEGG   Athene noctua (little owl): 141974157
Entry
141974157         CDS       T11550                                 
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
  KO
K15172  transcription elongation factor SPT5
Organism
anoc  Athene noctua (little owl)
Pathway
anoc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:anoc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    141974157 (SUPT5H)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:anoc03021]
    141974157 (SUPT5H)
   03019 Messenger RNA biogenesis [BR:anoc03019]
    141974157 (SUPT5H)
Transcription machinery [BR:anoc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     141974157 (SUPT5H)
  RNA polymerase I system
     141974157 (SUPT5H)
Messenger RNA biogenesis [BR:anoc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     141974157 (SUPT5H)
SSDB
Motif
Pfam: KOW1_SPT5 KOW4_SPT5 KOW KOW2_Spt5 KOW5_SPT5 KOW7_SPT5 Spt5-NGN KOW6_SPT5 KOWx_SPT5 Spt5_N GPKOW_C DUF3912 Ribonuc_P_40
Other DBs
NCBI-GeneID: 141974157
NCBI-ProteinID: XP_074789594
LinkDB
Position
Unknown:join(119374..119454,119535..119694,119778..119843,120472..120541,120640..120708,120818..120883,121030..121060,121149..121217,121301..121552,121638..121727,121990..122060,122189..122294,122419..122512,122592..122728,122821..122976,123078..123224,123382..123528,123913..124038,124140..124224,124303..124407,124522..124624,124804..124931,125487..125592,125715..125873,126205..126373,126989..127192,127293..127388,127576..127719)
AA seq 1078 aa
MSDSDDSNFSEDESEHSSEAEEAEENEAEEERTSAAGSEKEEAEEEEEEEEEEYDEEEEE
EDDDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKASNIDNVVLDEDRSGARR
LQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKC
KIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGN
LRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQIS
LKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFEGN
RYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQPGD
NVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGR
FEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGELVQLDP
QTVGVIVRLERETFQVLNMYGKVVTVRHQAVSRKKDNRFAVALDSEQNNIHVKDIVKVID
GPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGGFTP
MSPRISSPMHPSGAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATE
STARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYGSGSRTPMYGS
QTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFDDEPTPSPQ
GYGGTPNPQTPGYPDPSSPQVNQPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSPSPQ
SYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPG
SGIEQSSSDWVTTDIQVKVRDTYPDSQAVGQTGVIRSVTGGMCSVYLKDSEKVVSISSEH
LEPVTPTKSNKVKVILGEDREATGILLSIDGEDGIVRMDLEEQLKILNLRFLGKLMEA
NT seq 3237 nt   +upstreamnt  +downstreamnt
atgtcagacagcgacgacagcaacttctcggaggacgagagcgagcacagcagcgaggct
gaggaggctgaggagaacgaggccgaggaggagcgcaccagcgctgctggcagcgagaag
gaggaagctgaggaggaggaggaagaagaagaggaggagtatgatgaggaggaggaggag
gaagatgatgatcgaccagccaagaagccacgccatggcggcttcatcctggatgaggcc
gacgtggatgacgagtacgaagacgaggaccagtgggaggacggggccgaggacatcctg
gagaaagcttccaacatcgataacgtggtgctggatgaagatcgctccggcgctcggcgg
ctgcagaacctctggagggaccaacgtgaggaggagctgggcgagtattacatgaagaaa
tacgccaagtcgtcggtgggagaaaccgtttatggtggctccgatgagctctcggatgac
atcacgcagcagcagctgctgcctggagtcaaggaccccaatctttggactgtgaagtgc
aagatcggtgaggagcgcgccacagccattgctctgatgcggaaatttattgcttaccag
tttaccgacacacccctgcagatcaagtcggtggtggcccccgagcacgtcaagggttac
atctacgtggaggcctacaaacagacgcacgtcaagcaggcgatcgagggggtgggcaac
ctgcgcatgggctactggaaccagcagatggttcccatcaaggagatgaccgacgtcctc
aaagtggtcaaagaagtcaccaacctcaaacccaaatcttgggtgcgcctcaaaaggggg
atctacaaagatgacattgcccaggtggattacgtcgagcccagccagaaccagatttcc
ctcaaaatgatcccccgcatcgacttcgaccgcatcaaagcccgcatgagcttgaaggac
tggtttgccaagaggaagaagttcaagcgacccccgcagcggctttttgacgccgagaag
attcggtccctgggaggtgacgtggcgtctgacggcgactttctcatctttgaaggcaac
cgctacagccgcaagggattccttttcaagagcttcgccatgtcggccgtgataacggag
ggagtaaagcccaccctgtccgagctggagaagttcgaggaccaacccgaaggcatcgac
ctggaggtggtgacggagagcacagggaaggaacgagagcacaatttccagcctggtgac
aatgtggaggtgtgcgagggcgagctgatcaacctgcaaggcaaaatcctcagcgtcgac
ggcaacaaaatcaccatcatgcccaaacatgaggatttgaaggacatgttggagttcccg
gctcaggagctacggaaatatttcaagatgggcgaccacgtcaaagtgatcgcggggcgt
tttgagggtgacacggggctgatcgtgagggtggaggaaaactttgtcatcctcttctcc
gacctcaccatgcacgagctcaaagttctgccccgggacctgcagctctgctcggagaca
gcgtccggtgtggatgctggggggcagcacgagtggggcgagctggtgcagctggacccc
caaaccgtgggtgtcatcgtccgcctggagcgagagaccttccaggtgctgaacatgtac
gggaaggtggtgacggtgcggcaccaggctgtcagcaggaagaaggacaatcgcttcgcc
gtggccctcgactcggagcagaacaacatccacgtcaaggacatcgtcaaagtcatcgac
gggccgcactcgggccgtgagggggagatccggcaccttttccggggcttcgctttcctg
cactgtaagaagctggtagaaaacggtggaatgttcgtctgcaaaacccgacacctcgtc
ctggcggggggttccaagccgcgggacgtcaccaacttcaccgtgggaggcttcaccccc
atgagcccccgtatcagcagcccgatgcaccccagtggggctggccaacgcggcggtttt
ggcggcggcggcatgagccgtggccgtgggcgtagggataacgacctcatcgggcagacg
gtccgcatctcccaaggaccctacaaaggttacatcggggtggtgaaggatgcgacggag
tcgacggctcgcgtggagctgcactccacctgccagaccatctcggtggaccgccagcgc
ctgaccaccgtgggctcgcggcgcccgggcgggatgacatcggcctacgggcgcacccca
atgtacggctcccagacccccatgtacggctccggctcccgcacccccatgtacggctca
cagacccccctgcacgacggcagccgcacgccgcactacggctcgcagacgccgctgcat
gacggcagccgcacgcccgcccagagtggcgcctgggaccccaacaaccccaacaccccc
tccagggctgatgaggacttcgagtacggctttgacgacgagcccacgccctcgccgcag
ggctatgggggtactccaaaccctcaaaccccggggtaccccgacccctcatccccccag
gtcaaccagccctacaaccctcagacccccggcacaccagccatgtacaacacagaccag
ttttcgccctacgccgttccctcgccacagggctcctaccagcccagccccagcccccag
agctaccaccaagtggcccccagccccgtgggctaccagaacacccactcgccggccagc
taccaccccacgccatcacccatggcttaccaggcaagccccagccccagtccagtgggc
tacagccccatgacccctggggccccctccccgggggggtacaacccccacacccctggc
tcggggatcgagcagagctccagcgactgggtgaccaccgacatccaggtgaaggtccgt
gacacctacccggacagtcaggcggtgggacagaccggcgtcatccgcagcgtcacgggt
gggatgtgctctgtctacctgaaggacagcgagaaggtggtgagcatctccagcgagcac
ctggagcccgtcacccccaccaagagcaacaaggtcaaggtgatcttgggggaggaccgt
gaagccaccgggatcctgctcagcattgacggggaggacgggatcgtccgcatggattta
gaggagcagctcaagatcctcaacctccgcttcctcggcaaactgatggaagcttga

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