Acetoanaerobium noterae: ANDSL2_21530
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Entry
ANDSL2_21530 CDS
T11295
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
anot Acetoanaerobium noterae
Pathway
anot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
anot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ANDSL2_21530 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anot03021
]
ANDSL2_21530 (rpoC)
03400 DNA repair and recombination proteins [BR:
anot03400
]
ANDSL2_21530 (rpoC)
Enzymes [BR:
anot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ANDSL2_21530 (rpoC)
Transcription machinery [BR:
anot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ANDSL2_21530 (rpoC)
DNA repair and recombination proteins [BR:
anot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ANDSL2_21530 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
XAM49617
LinkDB
All DBs
Position
complement(2250631..2254170)
Genome browser
AA seq
1179 aa
AA seq
DB search
MFELNNFESIQIGLASPEKIRQWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRDRARHKGIVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLL
DMSPRVLEKILYFASYVVIDPGETNLSENQLLNEKDYREALETHGHKAFKAMMGAEAVQE
ILKKVDLERLSKELKAKLKDATGQKRIKTIRRLEVVEAFRQSGNDPTWMILDVVPVIPPD
LRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPDIIVRNEKRMLQEAVDALID
NGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKFYQCGL
PKKMALELFKPFVMNELVKKNYAHNIKSAKRMVEKIKPEVWDILEEVIKGHPVLLNRAPT
LHRLGIQAFEPVLVEGKAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEGRFLMLSPN
NILAPKDGAPITTPTQDMVLGTYYLTIEEKGVIGEGSVFKDFTEMMLAYENHQVHLHARV
RVKVKKSSDDPGKLVESTVGRFIFNENIPQDLGYVDREKEPYALEVDFVLDKKTIGKVID
KCFRKHGNTMTAIMLDNIKNLGFKFSTRAAISVSVADMEIPEEKYALIREAEQKVEKYEK
NFRRGLMSDDERYERVIETWAKTTEEVTDALMKKLGPLNNINIMAVSGARGSKNQIRQLA
GMRGLMANASGKTVEIPVKSNFREGLSVLEYFTSSHGARKGLADTALRTADSGYLTRRLV
DVSQDVIVRELDCGTNEGIEVSAFKDGNEEIEGLFDRIAGRYALENVIHPETNELIVPAG
EMIQETDAEKIVAAGIEYLKIRTPLNCKAKKGICAKCYGRNLATGKEVNVGEAVGIIAAQ
SIGEPGTQLTMRTFHTGGVAGGDITQGLPRVEELFEGRKPKGLAVITEVAGTVRIEETGR
KKEAIVTTDSGEEKNYTIPYGSRMKVKDGAKVKAGEPLTQGSINPHDILRVNGVTGVQDY
IVKEVQRVYRLQGVDINDKHIEIIIRQMLSKVKVEESGDTNLLPGALVDILELRRINENA
VENGLQPATIKRVLLGITKASLATESFLSAASFQETTRVLTEAAIKGKKDNLIGLKENVI
IGKLIPAGTGMKRYKTIEISTPDMVKPDSKEQKIEKFVD
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgaactaaacaactttgaatccatacaaatagggctagcttctccagaaaaaatt
agacagtggtctaagggagaagtaaaaaaacctgaaacaattaactacagaactttaaag
cctgagaaagatgggcttttctgcgaaagaatttttggacctacaaaggactgggaatgc
cactgcggaaaatataaaagagatagagcaagacacaagggtatagtttgtgaccgttgc
ggagttgaggttacaagatcaaaagtaagaagagaaagaatgggacatatagagctagct
gctccagtttctcatatttggtattttaaaggaatcccatctcgtatggggctccttcta
gatatgtcacctagagtgttagagaagattctttattttgcatcttatgttgtaattgac
ccaggcgagactaacctatctgaaaatcagcttcttaatgaaaaagattacagagaagct
cttgagactcatggccataaagcgttcaaagctatgatgggtgctgaagctgttcaagaa
atacttaaaaaagttgaccttgaaaggctttcaaaagagctcaaagctaagcttaaggat
gctactgggcaaaaaagaattaagactataagaagattagaagtagtagaagcatttaga
caatctggaaatgatcctacgtggatgattttagatgtagttccagttattcctccagac
cttagacctatggtacagcttgacggaggaagatttgcaacttctgacctaaatgatttg
tatagaagagtaataaatagaaataaccgtctaaaaagacttcttgagcttggagcacct
gatatcatcgttagaaatgaaaaaagaatgcttcaagaggcagtcgatgctcttatagac
aacggaagaagaggaagaccagtaactggtcctggaaacagacctcttaagtctctttct
gacatgctaaaaggaaagcaaggacgtttccgtcagaaccttctaggaaagcgtgttgac
tattctggacgttcagttatagtagttggaccagagctgaagttttatcagtgtggactt
cctaagaagatggcattagaactatttaagccatttgtaatgaatgagctagttaagaaa
aattacgcacacaacataaagagtgcaaaacgtatggttgaaaagattaaaccagaggtt
tgggatattctagaagaagtaataaaaggacatccagtacttctaaaccgtgctccgact
ctgcatagactaggaatacaagcatttgagccagttttagtcgaggggaaagcaataaag
cttcatccacttgtatgtactgcttataatgcagactttgatggagaccagatggctgtc
cacgtgcctctttcagtagaagcacaagccgagggaagattcttaatgctttctccaaac
aatatactagcgcctaaagatggagcgcctatcactactcctactcaggatatggtactt
ggtacttactaccttactattgaagaaaagggtgttataggagaaggctctgtatttaag
gacttcactgaaatgatgcttgcttatgaaaatcatcaggttcatcttcatgcaagagta
agagtaaaagtaaagaaatcttcagatgacccaggaaaacttgttgagagtactgttgga
agatttatctttaatgaaaatattcctcaggatttaggatatgtagatagagaaaaagag
ccttatgctcttgaagttgattttgtattagacaagaaaacgataggtaaggttattgac
aaatgctttagaaagcatggaaacaccatgactgctatcatgcttgacaatattaaaaat
cttggatttaagttctctactagagcagctatatctgtttcagttgctgatatggagatt
ccagaagaaaaatacgcactgataagagaagctgagcaaaaagttgaaaagtatgaaaag
aacttcagaagaggacttatgtctgatgatgagagatatgaaagagtaatagagacttgg
gctaaaacgactgaagaagtaactgatgctcttatgaagaaactaggacctcttaataac
atcaacatcatggcggtatctggagcaaggggttctaaaaaccagattagacagcttgct
ggtatgcgtggtcttatggcgaatgcatctggtaagacagttgaaattccagttaaatcg
aacttccgtgaaggactatctgttcttgagtactttacatcttctcacggtgcccgtaaa
ggtctagccgatacagcacttcgtacagctgactctggatacctaacaagaagacttgtt
gacgtatcacaggacgttatcgtaagagagcttgattgtgggacaaatgaaggaatagaa
gtaagtgcatttaaagacgggaacgaggaaatagaaggtctattcgatcgtatcgcagga
agatatgcactagagaatgtaattcatccagaaactaatgaactaattgttccagcaggg
gaaatgattcaagaaactgatgctgaaaaaattgttgcagctggtattgaatatctaaaa
atacgtacacctcttaactgtaaagctaaaaaaggtatctgtgctaaatgctacggacgt
aacctagcaacaggaaaagaagtaaatgtaggtgaagctgtaggtattattgcggcacag
tcaatcggtgagccgggtactcagcttacaatgcgtaccttccatacaggtggagttgca
ggaggagatatcacgcaaggtcttccgagggttgaagagcttttcgaaggtagaaaacct
aagggacttgctgttattactgaggttgcaggaactgttagaatagaagaaactggaaga
aagaaagaagctatagttaccacagattcaggggaagagaagaactacactattccttat
ggctctagaatgaaagtaaaagatggtgctaaagttaaagccggagaaccacttacacaa
ggatctattaatcctcatgatatccttagagttaatggagtaactggggttcaagactat
atagttaaagaggttcaaagagtgtatagacttcagggtgttgatatcaatgataaacac
attgaaatcataataagacaaatgctttctaaagtaaaagtagaagaatcaggagataca
aaccttcttcctggagctctagttgatatcttagaactaagacgcataaatgaaaatgca
gttgaaaatggcttacagccagctactataaaaagagttctgcttggtataactaaagca
tctcttgcgacagaatcattcttgtcagcggcatcattccaggaaactacaagagttctt
actgaggcagctataaaaggcaagaaggacaatctaattggactaaaagaaaatgttatt
atcggaaagcttattccagcgggtacaggcatgaagagatataagacaatagaaatttcc
actcctgatatggttaagccagactctaaagagcaaaaaatagagaaatttgtagattaa
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