Antarcticibacterium arcticum: FK178_03170
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Entry
FK178_03170 CDS
T06142
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
anp
Antarcticibacterium arcticum
Pathway
anp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FK178_03170 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anp03019
]
FK178_03170 (rny)
Messenger RNA biogenesis [BR:
anp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FK178_03170 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
FtsX
ZapG-like
Motif
Other DBs
NCBI-ProteinID:
QED36768
UniProt:
A0A5B8YIB2
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Position
735921..737486
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AA seq
521 aa
AA seq
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METTTTIIISVFIGLVLGYIIAKILERNNASKVIQRAKKSAAAILKEAKSEAESIKKDKI
LQAKEKFIELKSEHEKVILGRDKKIGEAEKRIRDKESLVSSELAKNKNLNKDLEDKVKDY
DHRNEYLEKKQQEIDKLHFSKIQQLEVISGLSAEEAKAQLTESLKDTARAEAMSLIQDTI
EEAKLTAQQEAKKIIITTIQRIGTEEAIENCVSVFNLESDDVKGRIIGREGRNIRAIEAA
TGVEIIVDDTPEAIILSCFDTVRREVARLSLHKLVTDGRIHPARIEEVVKKTRKQIDEEI
IDIGKRTVIDLGIHGLHPELIKAVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLNTK
LAKRAGLLHDIGKVPDTETEMPHALLGMQWAEKYGEKPEVCNAIGAHHDEIEMNSLLSPL
VQVCDAISGARPGARRQVLDSYIQRLKDLEEIAFGFGGVKKAYAIQAGRELRVIVESEKV
TDDKAATLSFEISQKIQTDMTYPGQVKVTVIRETRAVNIAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggagacaacaacaactataataatttctgtttttattggtctggttttaggctatatc
attgctaagatcctggaaaggaacaatgcaagtaaagtgatacaacgcgccaagaaatcg
gccgctgcaattttaaaagaagccaaaagcgaagcagagtcaataaagaaagataagatc
cttcaggcaaaagaaaagttcatagaattaaaaagtgaacatgaaaaggtgatcctgggt
agagataagaagattggggaggccgaaaagcgcattcgcgataaagagtcacttgtgtcc
agcgagctggccaagaacaagaatctgaataaggaccttgaggataaggtaaaggattat
gatcacaggaatgagtacctagaaaagaaacaacaggagatagataaattacactttagt
aaaatccagcaactggaagtaatttcaggcctttcggccgaggaagccaaagcccagtta
acagaatcactgaaggataccgccagggcagaggctatgtcgcttattcaggatactatt
gaagaagctaagcttacagcccagcaggaagcaaagaaaattattattaccacgattcaa
cgtattggaactgaagaagcaattgaaaattgtgtatcggtattcaaccttgaaagtgac
gatgtaaaagggcgtataattggtagggaaggccgtaatatcagggccattgaagctgcc
acgggagtggagatcattgtagatgatacgccggaggccattattctatcatgttttgat
accgtacgaagagaggttgcaagactttcccttcacaaactggttacagatggccgtatc
caccctgcccgtattgaagaggttgttaaaaagaccaggaaacaaattgatgaagagatc
attgatataggaaaacgtactgttatagatcttgggattcacgggttgcacccggaattg
atcaaggcggtaggtagaatgaaatacaggtcttcttacggtcaaaaccttttacagcac
tcgagagaggtagctaaattatgcggggtgatggcagcagaattaggattgaataccaaa
ctggccaaacgtgcaggtcttttacacgatataggaaaggttccagatactgagactgaa
atgccacacgcactacttggaatgcagtgggctgaaaaatatggggaaaaaccggaagtt
tgtaacgctattggagctcaccacgatgaaattgaaatgaattcactcctatcgccattg
gtacaggtttgtgacgccataagcggggcaagaccgggtgcgagaagacaagtgcttgat
tcctacatccaacgattgaaggatcttgaggagattgcttttggttttggcggagttaaa
aaagcttatgctatccaggcgggtagagaattaagggtaattgttgagagtgaaaaagta
accgatgataaggcggctactctatcctttgagatctcacaaaagatccagacagatatg
acatatcccggccaggtaaaagtaaccgtaataagggaaacaagagcagtgaatattgca
aagtaa
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