Antarcticibacterium arcticum: FK178_07295
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Entry
FK178_07295 CDS
T06142
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
anp
Antarcticibacterium arcticum
Pathway
anp03420
Nucleotide excision repair
anp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
anp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FK178_07295
03430 Mismatch repair
FK178_07295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anp03400
]
FK178_07295
Enzymes [BR:
anp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FK178_07295
DNA repair and recombination proteins [BR:
anp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FK178_07295
MMR (mismatch excision repair)
Other MMR factors
FK178_07295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
nSTAND3
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QED37541
UniProt:
A0A5B8YIT1
LinkDB
All DBs
Position
complement(1621115..1623439)
Genome browser
AA seq
774 aa
AA seq
DB search
MESYLAELNDAQRAPVLQKDGAMIVIAGAGSGKTRVLTYRIAYLMSKGVDPFNILALTFT
NKAAREMKKRIASIVGNSEAKNLWMGTFHSIFAKMLRFEADKLGYPSNFTIYDTQDSQRL
ISAIIKEMALDKDVYKYKQVYSRISSYKNSLITVKAYFANPELMEADAMSKKPRLGEIYK
NYVDRCFKAGAMDFDDLLLKTNELLNRFPDVLHKYQNRFRYILVDEYQDTNHSQYLIVKA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYENVQMYRLEQNYRSTRNIVNAANS
IIEKNKTKLDKVVWTANDDGTKIVVNRLLNDGEEGRFVASSIFENKMQNQLNNGDFAILY
RTNAQSRAMEDALRKREIPYRIYGGLSFYQRKEIKDVLSYLRLLVNPNDEEALKRVINYP
ARGIGQTTIDKLTILANQYGRSIFEVIENIDQLNIKINSGTRNKLSNFVNMIKSFTILNE
NADAFTVADTVARKTGLIQELKKDGTPEGVARIENIEELMNGIKDFVEGQKELADATGSL
TEFLEDVALATDMDKDTGDDDRVALMTIHLAKGLEFPFVYIVGMEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTQSRYRWGKLIDAEPSRFIEEIESQFLDYMVPQDDYK
YKPLIDTDIFGEVDKSSLRQTKPRSGSPPPAHKPSEEQLRKLRKLRPATSVPTNISHTDG
IKLEEGNEVEHIRFGKGVVLKIDGVGQDKKAEIDFQNGGIKKLLLRFAKLKLLS
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
ttggaatcttatttagctgaattaaatgatgcccagcgggcgcctgttcttcaaaaggat
ggagcaatgattgtgattgcgggagcggggtctggcaaaacgcgggtgcttacctaccgt
atcgcatatcttatgagcaagggggtagatccctttaatatactcgcgcttacttttacc
aacaaggctgcccgcgaaatgaaaaagcgtattgccagtattgtgggcaacagtgaagca
aagaatttgtggatgggaactttccattcaatttttgcgaaaatgctgcgatttgaagcc
gataaacttgggtacccatccaatttcaccatttatgatacccaggattcccaaaggctt
atttcggcaattataaaagaaatggcgttggataaggatgtttataaatataagcaggtc
tattcccgtatctcttcatacaagaacagtcttattacggtgaaagcgtattttgccaat
cctgaattaatggaggcagacgctatgtctaaaaagcccaggctgggtgagatctataaa
aattatgttgaccgctgttttaaagccggtgcgatggattttgatgacctgcttcttaaa
accaatgaacttctcaacaggtttccagatgtgctgcataaataccagaaccgtttccgg
tatatcctggtagatgagtaccaggataccaatcattcccaatatttgattgtgaaagcc
ctttcagataaattccagaacatatgcgtagtgggagatgatgctcagagtatttacgct
ttccgcggagctaatattaataatattctgaatttccagaaagattatgagaatgtacaa
atgtacaggctggaacaaaattatcgctcaacccgaaatattgtaaacgcagccaattcc
ataatagaaaaaaataagaccaaactggacaaggtagtttggaccgcgaatgatgacggg
acaaaaattgtggttaaccggctgctgaatgatggggaagaaggaagatttgtggccagt
tccatttttgagaacaaaatgcagaatcagttgaacaatggggattttgcgattttgtac
aggaccaatgcgcaaagccgtgccatggaagatgcacttcgaaaaagggagatcccgtac
aggatctatggcggactttcattttaccagcgaaaagagataaaggatgtactttcctat
ttgagattgcttgtaaatcccaatgacgaggaagccctgaaacgggtgatcaattacccg
gcaagaggtattgggcaaaccactatagacaagcttaccattcttgcaaatcaatacgga
cggtccatttttgaggtgattgaaaatatagatcagctaaatatcaagatcaattcaggt
accaggaacaagctttccaatttcgtgaatatgatcaagagcttcaccatattgaatgaa
aatgccgatgcttttacggttgccgataccgttgcccggaaaacagggctcatccaggaa
cttaaaaaggacggtacgcctgaaggggttgcgagaattgagaatatagaggagttgatg
aacgggatcaaggattttgtggaagggcagaaagaactggcagatgctaccggttcccta
accgaattcctggaagatgtagcccttgcaacagatatggataaggataccggagatgat
gaccgggttgcacttatgaccattcaccttgccaagggattggaatttccgtttgtttat
atagtagggatggaggaagatctttttccttcggctatgagtatgaatacccgttctgaa
cttgaggaggaaagacgcttgttttatgtggcgctcacccgcgctgaaaaacaggcatat
cttacctacacccagtcccgttaccgttgggggaaacttattgatgcagagccaagccgg
tttattgaagagatagagtctcagttccttgattatatggtgccgcaggatgattataaa
tacaaaccgctaatagatacagatatttttggagaggtagacaaaagcagcctgcgccaa
accaaacccagatccggttccccgccaccggcccacaaaccaagtgaggagcagttaaga
aagcttagaaaacttaggcctgcaacgtcggtgcctaccaatatttctcatacagatggt
attaaactggaggagggcaatgaagttgaacatataagatttggtaaaggggtagtttta
aagatagacggagtaggccaggataaaaaagctgagatagattttcaaaatggcggaata
aaaaaattattacttcggtttgccaagttaaaattactttcttaa
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