Antarcticibacterium arcticum: FK178_14840
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Entry
FK178_14840 CDS
T06142
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
anp
Antarcticibacterium arcticum
Brite
KEGG Orthology (KO) [BR:
anp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anp03032
]
FK178_14840 (gyrB)
03400 DNA repair and recombination proteins [BR:
anp03400
]
FK178_14840 (gyrB)
Enzymes [BR:
anp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FK178_14840 (gyrB)
DNA replication proteins [BR:
anp03032
]
Prokaryotic type
DNA Topoisomerases
FK178_14840 (gyrB)
DNA repair and recombination proteins [BR:
anp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FK178_14840 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QED38916
UniProt:
A0A5B8YR07
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Position
3270501..3272441
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AA seq
646 aa
AA seq
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MSEEAKKNSYSADSIQALEGMEHVRMRPSMYIGDTGVRGLHHLVYEVVDNSIDEAMAGHC
DTIKVTIQKDGSVKTEDNGRGIPVDLHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSCVNALSQSLKATVYRDGTIWEQEYELGKPLYPVKPVGETELSGTVITFKPDPSIF
QQTVDYSYDTLATRMRELSFLNKGITIYLTDERIVDEKGEIATEVFHSDDGLKEFVRFLD
GNRESIISDVISMEGEKNDIPVEVAMVYNTSFNENLHSYVNNINTHEGGTHLAGFRRGLT
TTLKKYADASGMLDKLKFEIAGDDFREGLTAIISVKVAEPQFEGQTKTKLGNREVTAAVS
QAVSEMLENYLEEHPGDAKIIVEKVILAAQARHAAKKARELVQRKTVMSIGGLPGKLSDC
SEQDPAKCEVYLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMTHRVFDNEEIKNI
YTALGVTIGTEEDSKALNLSKLRYHKVVIMCDADVDGSHIETLILTFFYRYMKELLENGH
IYIATPPLYLVKKGQKKQYAWNEKERDAIAESFNGSVQIQRYKGLGEMNAEQLWDTTMNP
EFRMLRQVNIDNSSEADRIFSMLMGDEVPPRREFIEKNAVYANIDV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaagcgaagaaaaacagttattcggcagatagtattcaggccctggaaggg
atggagcatgtgcgcatgcggccatccatgtacattggagatacaggggtaagaggtttg
catcacctggtttatgaagtggtagataattctattgatgaggccatggccgggcactgt
gacaccataaaagttacaattcaaaaagatggatcggttaagaccgaggataatggaagg
gggatcccggtagatcttcacaaaaaagaaggagtatcggctcttgaggtggtaatgacc
aagattggtgctggtggtaaatttgataaagattcctataaagtatccggaggtttgcac
ggggtgggggtaagttgtgttaatgcgctttcgcagagccttaaggccactgtttaccgc
gatgggaccatttgggagcaggaatatgaattgggaaaacctctttatcctgttaagccg
gtaggtgaaacagaacttagtggtaccgttatcactttcaagccagatcccagtattttt
caacaaaccgtagattatagttatgacacccttgcaacgagaatgcgggaattgtcattt
ttaaataaagggatcacaatatatcttacagatgagcgtattgttgatgaaaaaggggaa
atagccacagaggtctttcattcagatgatggtctaaaggaatttgtaagatttcttgat
ggcaaccgtgaatctatcataagtgatgtgatctcaatggaaggagaaaagaatgatatc
cccgttgaagttgcaatggtttacaatacctccttcaatgagaatttgcattcttatgta
aacaatatcaatacgcatgaaggtggaacccatcttgcaggttttagaagaggtcttact
actacattaaagaaatatgcagatgcatccggaatgctggataagctgaaatttgaaatc
gccggagatgattttcgtgagggattgacagctattatttcagtaaaagttgcagaacct
caatttgagggtcaaaccaagaccaagttagggaacagggaagtaacagctgcggtatca
caggctgtttctgaaatgcttgagaattatctggaagaacatcccggggatgccaagatc
attgttgaaaaagtgatccttgctgctcaggcgcgtcacgcggccaagaaagcgagagaa
ctggtgcagcgtaaaactgtaatgagtattggcgggttgcccggaaaattatcagattgt
tctgagcaggatcctgcaaaatgtgaggtgtaccttgtagagggagactcggcaggtggt
actgccaagcagggaagagacaggaattttcaggctattttgccattaaggggtaagatc
ctgaatgtggaaaaagcaatgacccacagggtgtttgataatgaggagataaaaaacata
tatactgcacttggtgttaccattggaaccgaggaagacagtaaagcacttaacctttcc
aaacttcgataccataaggtggtcataatgtgtgatgctgatgtggatggtagccacatt
gaaacgcttatccttactttcttctatagatatatgaaggaattactggaaaatggacat
atttacattgcaaccccacccttataccttgttaaaaaaggccagaaaaagcaatatgcg
tggaatgaaaaagaacgcgatgccatagctgaaagttttaacggaagcgttcaaattcag
cgatataaaggtttgggagagatgaatgcagaacaattgtgggatactacaatgaatccg
gaattcaggatgctgcgacaggtgaatattgataatagcagtgaggccgacaggatcttc
tctatgttgatgggagatgaggtaccgccaagaagggagtttatagagaaaaatgctgta
tatgccaacattgatgtttaa
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