Amygdalobacter nucleatus: PYS63_05680
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Entry
PYS63_05680 CDS
T09414
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
anq
Amygdalobacter nucleatus
Pathway
anq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
anq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PYS63_05680
09124 Replication and repair
03420 Nucleotide excision repair
PYS63_05680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anq03021
]
PYS63_05680
03036 Chromosome and associated proteins [BR:
anq03036
]
PYS63_05680
03400 DNA repair and recombination proteins [BR:
anq03400
]
PYS63_05680
Enzymes [BR:
anq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PYS63_05680
Transcription machinery [BR:
anq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PYS63_05680
Chromosome and associated proteins [BR:
anq03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PYS63_05680
DNA repair and recombination proteins [BR:
anq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PYS63_05680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
ResIII
DEAD_2
DEAD
PhoH
FHA2_C
RIN1
Phospholip_A2_1
CSN8_PSD8_EIF3K
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
WEG36630
LinkDB
All DBs
Position
1245897..1248017
Genome browser
AA seq
706 aa
AA seq
DB search
MQESDRSFKTIYKEHVYLRNLSLHKLKLPYAKLRPGQKDLLQEITAALIDKTTYLLNAPT
GFGKTFVCLAPALACLAKDKIKRIYYFTNQESQRDLPANFLNELRKLNQLQFWSQTLYSS
ERCCKQHDFCYLNYNKLTIKQTVETLLRTFNGHIDFATLQTWANQYKLCPYLLQMELANY
MDLLILDYNYLFDPLQQLSSLKKAEGPLALLFDEAHNLPARGKEMFQVTLSLQDFISYAK
MLDAYILTSKQFTISEQNKANLIELKQLTNNLANNFKELTKLCLAANGVDKKAISKLLNL
EEAEIIVSQTENTSNLYTRQSWPKLGKLLTNFIAKFTEFVKSEQSQLVSSYAELRELRDN
LTKLKRLNYLLSNYQPSFIGSFHWRKQGSKPYASLAIHCLDAMPLLRQSLPSNAGKIFFS
ATLLPLDYYEQLFSEPNEQINSTAAKSPFPVENRKVAILSYANLTYQNRDFNAKLIAKSL
LAYLKQIGGHLLVFAPSYRYAAKLQQALSQIWPSSGYNLISQMAKASLKAKQAFINTLKD
TSDKRPLLALAVLQSSYSEGLDLPGASITGIAIISVSYPAKSDLLSLQQAYFAENYRRES
NFPSDDNQILMADYYEEAPAMQKANSQLPSDPAYLFTQLYPSFNKIVQACGRLIRTETDK
GEIMLFDERFTRAEYQPLLKAAFSEYCILPDLNSYVDWLKKLKKHK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaatctgatcgttcattcaaaacaatttataaggaacatgtttatttgcgcaac
ttgagtttgcacaagttaaagctgccttatgccaaattacgccctgggcaaaaagactta
ttacaagaaattaccgctgctctcatagataaaacaacctatcttctcaacgccccaact
ggctttggcaaaacttttgtctgcttagcgccggctttagcctgcttagccaaagacaaa
atcaagcgcatctattatttcaccaatcaggaaagtcaacgcgatttacctgccaatttt
ctaaatgaattacgcaagttaaatcagttacagttttggtcgcaaactctatacagcagc
gaacgttgctgtaagcaacacgatttctgttatttgaactacaataagctgacaattaag
caaacagtagaaactttacttcgcacttttaacggtcacattgattttgctacgcttcag
acatgggcgaatcaatacaagctctgcccttatctcttacagatggaattagctaattat
atggacctcttaatccttgattacaattacctgttcgaccctttgcaacagttaagttcc
ctgaaaaaggctgaagggccattagccttgctctttgacgaggcacacaatctaccagct
cgaggcaaggagatgttccaagttacgttaagtttacaagacttcatcagctacgcaaaa
atgctagatgcttatattttaacaagcaagcaatttacgataagcgaacaaaataaagcg
aatttaattgagcttaagcagcttacaaataatttagctaataatttcaaagaacttact
aaactctgcctagcagcaaatggcgtagacaaaaaggcaattagcaaattactcaatctt
gaagaagctgaaattatcgtcagccaaacggaaaatacttctaacctttatactcgccaa
agctggcctaagttaggcaaactcttgactaactttatagcgaaattcactgaatttgtt
aaatctgagcaaagtcagttagtttcaagctatgctgaattaagagaattaagggataac
ttgaccaagctcaagcgcttaaattatttattgagcaattatcagcctagtttcataggt
agctttcattggcgtaagcaaggttcaaaaccatatgccagcctagccattcactgcctc
gatgctatgccgcttttgcgtcaaagtctgcctagcaatgctggaaagatctttttctct
gccaccttactgccattagattattacgaacaattattttcagagccaaatgaacaaatt
aacagcacggctgctaagtcgccttttccagttgaaaatcgtaaagtagctatcttgagt
tacgctaatttaacttatcagaatcgcgattttaatgccaaattgattgctaaatccttg
ctagcctacctcaagcaaattggtggccatcttttagtctttgcgccatcttatcgctat
gcagcaaaattacagcaagctcttagccaaatctggccaagttcaggctataacctgatt
agccaaatggcgaaagccagcttaaaagctaaacaagctttcataaatactctcaaagat
acaagtgataagcgaccacttttagccttggctgtcttacaaagcagttatagcgagggc
ttagacctgccaggtgctagtatcacaggcattgctatcatcagtgtcagttatccagcc
aaatctgatttgttaagtttgcagcaagcttattttgccgaaaattatcgaagggaatct
aactttccctctgacgataaccaaattctcatggctgattattatgaagaagcaccagct
atgcaaaaagcaaactcacagctaccttctgaccctgcctatcttttcacccagctgtac
cctagtttcaacaaaatcgtgcaagcttgtggccgcctgattagaactgaaacagacaag
ggcgaaatcatgctatttgatgaacgttttacccgcgctgaatatcaacctttgttgaaa
gcagctttcagtgaatattgtattctcccagatctaaatagttatgtagattggttgaaa
aaattaaaaaagcataaataa
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