Amygdalobacter nucleatus: PYS63_06235
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Entry
PYS63_06235 CDS
T09414
Name
(GenBank) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
anq
Amygdalobacter nucleatus
Brite
KEGG Orthology (KO) [BR:
anq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
anq03016
]
PYS63_06235
Enzymes [BR:
anq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PYS63_06235
Transfer RNA biogenesis [BR:
anq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PYS63_06235
Prokaryotic type
PYS63_06235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WEG36734
LinkDB
All DBs
Position
complement(1378839..1380059)
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AA seq
406 aa
AA seq
DB search
MLNNSIYLIYKSIGPSSFACVNQLRHSLGAEKAGHIGTLDPFAEGLLPVFVNRATRLIPY
LEVASKTYRALVVLGAKSTSLDANGELVSKQELSFQTYYALLKDDAALAKAQIQQLVGVS
EQEIPLYSAKKVNGKKLYEYARQNQSVEKQYKTIEVTAAKLLNFQGIISQTELAELDLAK
LEQLYTERLNELKQQKAWPNPTLFPAAKARLQMKKLAKPLEQAAISAWCKFTPTLYFDIE
FTVSKGTFIRALVADLGKRLGTEAYTLRLLRTKVGQFDLADAHSESEWQDLFAQTKSETE
RAKLGLNLQTAFSNLPNYVCNDKEHKWLLQGRTLSFYQKELAKKPEYSTEHLWKNLINLP
AMSIIKQRQYVLAIYEGQVIALLSLQEMEQGLQLVPERMLFSHEDL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgctgaataattcaatatacttgatctataaaagtatcggccccagttcctttgcctgt
gtcaatcagctaagacatagcttaggtgcagaaaaagcaggtcatattggtaccttagat
ccctttgccgagggcttattacccgtgtttgtcaatcgggcaacgcgcttgattccttat
ttggaagttgctagcaaaacttatcgcgccttagttgttctaggtgctaaaagcacgagc
ttggatgccaatggtgaacttgtatctaagcaggaattaagctttcaaacttattacgct
ttgctaaaagacgatgcagctttagctaaagcacaaattcagcaattagtaggcgtaagt
gaacaagaaataccgctttattcagctaaaaaggttaatggtaaaaagttatatgagtat
gccaggcaaaatcagtctgtcgaaaaacagtataaaacgatagaagtaacggctgccaaa
ttgttgaattttcaaggtatcatcagccaaacagagttagcagagcttgatttagctaaa
ttagagcaattatatacagagcgcttaaatgaattaaaacagcagaaagcctggccaaat
ccaactctatttccagcggccaaagctcgattgcaaatgaaaaaattagctaaaccattg
gagcaagctgcaatttctgcttggtgtaaatttacaccaacgctttattttgatattgag
tttactgtcagtaagggaaccttcattcgcgccttagttgcagatttaggcaagcgctta
gggacagaggcttatacgctgcgtttgttgagaacaaaagtggggcaatttgatctagct
gatgcacattcagaaagtgaatggcaggatttatttgcgcagaccaaaagcgaaactgaa
agggcgaagcttggccttaatttgcagacggcattttctaatttgccgaattatgtttgc
aatgataaagagcataagtggttgttacaaggtaggaccttgtcattttatcaaaaggaa
ctagccaaaaagccagaatattctacagaacatttatggaaaaatcttataaatttgcct
gcaatgagtataattaaacaaaggcagtatgtgttagcaatttacgaaggacaagttatc
gctttacttagtttgcaggagatggaacaaggcttacagcttgtaccggaaaggatgtta
tttagccatgaagatttataa
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