Anaerocolumna sedimenticola: Ana3638_04610
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Entry
Ana3638_04610 CDS
T06399
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
anr
Anaerocolumna sedimenticola
Pathway
anr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ana3638_04610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anr03019
]
Ana3638_04610
03009 Ribosome biogenesis [BR:
anr03009
]
Ana3638_04610
Enzymes [BR:
anr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ana3638_04610
Messenger RNA biogenesis [BR:
anr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ana3638_04610
Ribosome biogenesis [BR:
anr03009
]
Prokaryotic type
rRNA helicases
Ana3638_04610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
AAA_30
AAA_19
CobA_CobO_BtuR
Cas3-like_C_2
NAT10_TcmA_helicase
Hyccin
Motif
Other DBs
NCBI-ProteinID:
QHQ60151
UniProt:
A0A6P1TJC9
LinkDB
All DBs
Position
complement(1032370..1033962)
Genome browser
AA seq
530 aa
AA seq
DB search
MQTTKFEELGIIEPILRAIVDMGFEEASPIQANAIPIMLSGKDIVGQAQTGTGKTAAFGI
PLLQAIDPKNKHLQAVVLSPTRELAIQIADEIRKLATFLHGIKVLPIYGGQEISKQIRSL
KAGTQIVIGTPGRVMDHMRRKTVKFDDVKLVVLDEADEMLNMGFREDIETILKDVPEERQ
TVLFSATMPKPIMDIAKTYQKEAEIIRVVKKELTVPKIEQYYYEVKPKNKEEVLCRLIDM
YDPKLSLVFCNTKKQVDELVSVLQGRGYFAEGLHGDLKQQQRDRVMNSFRNGKTDILVAT
DVAARGIDVDDVEAVFNYDVPQDDEYYVHRIGRTGRAGRTGRAFTLVVGKEVYKLKDIQR
YCKTKIIAQPIPSMNDVTAVKAEKILDRVNNIINSEDLTKMVEIIEARVNAEDYTTLDIA
AAFLKMTMGEENEQIEEKESYMDYGDTGAEAGMVRLFINIGKKQNTRPGDILGAIAGETG
MPGKLIGSIDMYDKYTFVEVPREYASDVIQVMKDAKIKGKSINIEPANKK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaacgaaatttgaagaattaggaattattgaacccatattaagggcaattgtt
gatatgggctttgaagaagcatcaccgatacaagccaatgcgatccccattatgttatcc
ggtaaggatattgtggggcaggcacaaacaggaacaggtaaaacagcagcttttggtatt
ccgctattacaggcaattgatcctaaaaataaacatttacaggcggttgtattaagtccg
acgagagaattggctattcagatcgcagatgaaatcagaaaacttgcaacgtttcttcat
ggaattaaagtactgcctatttacggaggacaggaaatttcaaaacaaatacgttcttta
aaagccggtacccagattgtaattggtactccgggccgtgttatggaccatatgagaaga
aaaacggtaaaatttgatgatgtaaaacttgtggtattggacgaagcggatgaaatgtta
aatatgggatttcgtgaggacattgaaaccatattaaaggatgttccggaagaaaggcag
acggtactattttctgctaccatgccaaaacccatcatggatatagcaaaaacttatcaa
aaagaagcagaaatcattcgtgttgtgaaaaaagaattaaccgtacctaagattgaacag
tattattatgaagtaaaaccgaaaaataaagaagaagttttatgccgtttaattgatatg
tacgatccgaaattatccttagttttctgtaataccaaaaaacaggtggatgaactggta
tccgtacttcagggcagaggatattttgcagaaggacttcatggtgatttaaaacagcag
cagcgtgaccgtgttatgaacagtttccgtaacggaaaaacagatatcttagtagctacc
gacgtagcggcaagaggaattgatgtagatgatgtggaagcggtatttaattatgatgta
ccccaggatgatgaatattatgttcaccgtatcggccgaaccggtcgtgcaggacgtact
ggacgtgcctttacccttgtagttggaaaagaagtatataaattaaaggatatccaaaga
tactgcaagactaaaattattgctcagcctattccttccatgaatgatgtaacagctgta
aaagcagaaaagatattggatcgtgtcaataatattatcaattcggaagatttaacaaaa
atggttgaaattattgaggcccgtgttaatgcagaagactatactactttagatattgcg
gcggctttccttaaaatgaccatgggtgaagaaaatgaacagattgaagagaaagaaagc
tatatggattatggcgacaccggtgcggaagcaggtatggtaaggcttttcattaatatc
ggtaaaaagcagaatacaagaccgggagatatcttgggtgccatagccggagaaaccggt
atgcccggtaaattaatcggctctattgacatgtatgacaaatatacatttgttgaagtt
ccgagggaatatgcttcggatgtcattcaggttatgaaagatgcgaaaataaaaggtaag
agtattaatatcgaaccggctaataaaaaatga
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