Anaerocolumna sedimenticola: Ana3638_05555
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Entry
Ana3638_05555 CDS
T06399
Name
(GenBank) substrate-binding domain-containing protein
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
anr
Anaerocolumna sedimenticola
Brite
KEGG Orthology (KO) [BR:
anr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anr03000
]
Ana3638_05555
Transcription factors [BR:
anr03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Ana3638_05555
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
GntR
Peripla_BP_1
Peripla_BP_4
HTH_41
HTH_DeoR
HTH_11
MarR_2
HTH_Crp_2
HTH_28
WHD_CvfB
HTH_24
DUF4423
DnaD_N
DUF2298
Motif
Other DBs
NCBI-ProteinID:
QHQ60302
UniProt:
A0A6P1TJN6
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All DBs
Position
complement(1243819..1244907)
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AA seq
362 aa
AA seq
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MNNNELSKHAVLSLWIKENIADNTFKIGDKIPSENELASRFMISRQTVRQAIGTLVAEGI
LIREHGRGTYVNFPGKKEPADKTKRIGVITTYLDDYVFPSIIHGIEEVLTDGGYTMSLGI
THNKPSDEENCLIQMMQSGVDAFIVEGTKSALPNFNKRLYEQIKEKNIPTVFINGYYTGY
NDSYIILDDVKAGEMVADVLIQNGHKYIGGFYKSDDFQGIRRYEGLLKALKKNNLTINDT
SIIWYTTEDYKYYFEGTMDHIILNRLSEVTSVVCYNDLVAASLIRLLKRNGKNVPEDISV
VSFDDSFLSKQMVFNLTSIVYPAKKVGKKAAQIILQQLNVSKKPEHVVFEPILKIRDSVK
KL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaataataatgagctttccaaacatgcggtacttagtttatggattaaagagaatatc
gctgataatacctttaaaataggagataaaattccgtctgagaatgaactggcttcccgg
tttatgatcagccgtcagacagtcagacaggcaattggtacactggtagctgagggtatc
ctcatcagggaacacggaagaggaacttatgttaattttccgggtaaaaaagaacctgct
gataaaaccaaaagaattggtgttattactacctatttggatgattatgtttttccaagc
attatccacggaattgaagaagtcttaacagacggcggttataccatgtctcttggaata
acacacaataaaccctcggatgaggaaaattgcctgattcagatgatgcagagcggagtg
gatgctttcatcgtagaaggtacgaaatcagcccttccaaacttcaataaacgtctttac
gagcagataaaagaaaaaaatattcctaccgtatttattaacggttactacaccggttat
aatgattcttatattatattggatgatgtaaaagccggtgaaatggtagcagatgtttta
attcaaaacggccataaatatataggaggtttttacaaatcagacgactttcagggaatc
aggcgttatgaaggcttattaaaagcgctgaaaaagaataatcttaccataaatgatact
tctattatatggtataccacagaagactataaatattactttgaaggaacgatggatcat
attattttgaaccggctttctgaggttacttccgtagtttgttataatgatctggttgct
gcctccttaatacgtctcttaaagcgcaacggcaaaaatgttcctgaggatatctccgtg
gttagttttgatgactcttttttatccaaacaaatggtttttaatctaacctctattgtt
taccctgcaaaaaaagtgggaaagaaagccgcacaaattatattgcagcagctaaatgta
tcgaaaaaaccggaacatgtggtatttgaacctattttaaaaatccgggattccgttaaa
aaattgtaa
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