Anaerocolumna sedimenticola: Ana3638_06845
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Entry
Ana3638_06845 CDS
T06399
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
anr
Anaerocolumna sedimenticola
Brite
KEGG Orthology (KO) [BR:
anr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anr03019
]
Ana3638_06845
Messenger RNA biogenesis [BR:
anr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ana3638_06845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
QHQ60521
UniProt:
A0A6P1TKE3
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All DBs
Position
1530815..1531756
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AA seq
313 aa
AA seq
DB search
MRYIGELRDGEMVSETYLCKTKQSLKTKAGKNYYSLLLQDKSGTLDAKIWELSGGIDHFE
AMEYIRVDGQVICFQGALQLNIKRVRRSQEGEYDPADFVPTTTKNIDEMYNELLKFISSV
EQPHMRKLAESFFVQDKTFIAGFKSHSAAKSVHHGFVGGLLEHTLSVVKLCDYYAQNYPA
INRDLLITAAIFHDIGKLYELSAFPENDYTDDGQLLGHIYIGTEIIGTRIKTIPNFPVQL
ASQLKHCILAHHGELEYGSPKKPAIIEALALNFADNTDAKLQTMTEILNSGDEKSTWLGL
SRLFDSNIRRTTI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagatatattggagaacttagggatggagaaatggtttcggaaacctatctctgtaaa
acaaaacaatcattaaaaacaaaagcaggaaagaattattattctctgctactacaagat
aaatcaggaacattagatgcaaagatatgggagttgtccggcggaatcgaccattttgaa
gcaatggaatatatccgtgtagacgggcaggtaatctgttttcagggagcattacagctt
aatattaaacgggtaagaagaagccaggagggagaatatgatcctgctgattttgtacct
acaaccacaaaaaatatcgatgagatgtataatgaattattgaagtttatcagctctgtc
gaacaaccacatatgagaaaactggcggaaagttttttcgtgcaggataaaacttttata
gccggttttaaatcgcattccgcagcaaaaagtgtacatcatggtttcgtcggaggttta
ttggaacatactttaagtgtagtgaaactgtgtgattattatgctcaaaattatcctgcg
ataaatagggatcttctaattacagccgccattttccatgatatcggaaagctttatgag
ttatctgctttccccgaaaatgattatacggatgacggacagttattaggtcatatttat
attggaacagaaattataggaaccagaattaaaacaataccaaacttcccggttcagctg
gcttcccagttaaaacactgtatattagcccaccacggggaactggagtatggttcacct
aagaaaccagcgattattgaagctcttgctttaaattttgcggataatacggatgcaaaa
ctacagactatgaccgaaattttaaacagtggggatgaaaaatcaacctggcttggatta
agccgtttatttgattccaatatacggcgtactacgatctag
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