Anaerocolumna sedimenticola: Ana3638_08000
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Entry
Ana3638_08000 CDS
T06399
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
anr
Anaerocolumna sedimenticola
Pathway
anr03030
DNA replication
anr03430
Mismatch repair
anr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ana3638_08000
03430 Mismatch repair
Ana3638_08000
03440 Homologous recombination
Ana3638_08000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anr03032
]
Ana3638_08000
03400 DNA repair and recombination proteins [BR:
anr03400
]
Ana3638_08000
Enzymes [BR:
anr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ana3638_08000
DNA replication proteins [BR:
anr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ana3638_08000
DNA repair and recombination proteins [BR:
anr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ana3638_08000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QHQ60724
UniProt:
A0A6P1THV2
LinkDB
All DBs
Position
1780578..1784066
Genome browser
AA seq
1162 aa
AA seq
DB search
MNFTHLHLHTEYSLLDGSGKIKEMVARTKELGMDSMAITDHGVMYGVIDFYRACLAEGIQ
PVIGCEVYVAPGSRFDREANSSDDRYYHLVLLAENNTGYANLMKIVSKGFLEGFYYKPRV
DYEVLKEYSEGIIALSACIGGEIASNIRKGFYEEAKKAALRLKDIFGENNFFLELQDHGI
PEQKSVNQGLLRMSKETGIPLVATNDVHYTLESDAAAHDILLCIQTQKKVTDENRMRYEG
GQYFIKSPEEMLKIFPYATEALENTHKIAERCHVEIEFGEYKLPKFDVPAGITALEYLKK
LCYEGLNKRYPNPSQELIDRLDYEIETIRSMGFVDYFLIVGDFIKYARDHEIMVGPGRGS
AAGSIVSYSLGITNIDPIKYNLLFERFLNPERLTMPDIDIDFCFERRQEVIDYVVEKYGK
DRVVQIVTFGTMAARAVIRDVGRALDLGYGRVDTVAKMIPTELGITIEKALKLNPDLKTL
YDNDDDIRNLIDMSKRLEGLPRHTSMHAAGVVISKAPVMEYVPLSRASDDSITTQFTMTT
LEELGLLKMDFLGLRTLTVIQNAVRLINKRRNEGEKIDIDNIDYNDKNVYALFASAKTDG
IFQFESAGMKNFLKELKPSNLEDIIAGNALYRPGPMDFIPKYIKGKNQAGSIIYECPQLE
PILSPTYGCIVYQEQVMQIVRDLAGYSYGRSDLVRRAMSKKKASVMEKERYNFVYGNDEE
NVPGCIKNGISEEVANHIFDEMTDFAKYAFNKSHAAAYAVVAYQTAFLKCYYPVEFMAAL
MTSVIDNPGKVAEYIFTCRQMGIKILPPDINEGDSTFSVSEGAIRYGLSAIKGLGRPVIE
AVVKERESNGKFTSLRDFAERLSGKEVNKRTVESFIKSGAFDSLQGTRKQLMMIYVQVLD
DVAQTKKRNLSGQMSLFDFAEEEEKTEYENNLPDVGEYTIEQKLSFEKEVMGIYASGHPL
EAYGELMKKNITATTMDFVIDEETNETKVNDGEMATVGGIITGKTVKTTRTNSMMAFVTL
EDMVGAVEIIVFPKDYDKYKMLLVEDNKVLVRGKIAVEEEKNAKLICQTIIPFESIPKVI
WIKYPNKEKFVEDEQRLYTILREYDGTDSVCIYLECEKAIKHLPKSMGIKAEIELIDKLK
QTYSEANIKVIENSIEKARKID
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaattttacacatttacatttacatacagaatacagtttattagacggttccggcaag
attaaagagatggtggccagaaccaaggaattaggtatggacagtatggcaattacagac
catggtgttatgtacggcgtaattgatttttaccgtgcctgtctggcggagggaattcag
cctgtaatagggtgtgaagtctatgtagcaccgggatcccgttttgaccgggaagctaat
tcatccgatgaccgttattaccatctggtattgttagccgaaaataataccgggtatgct
aacttaatgaagattgtatccaaaggatttttagagggattttattataaaccacgagtt
gattacgaagttctcaaagagtacagcgagggtattattgccctgagtgcctgcattgga
ggcgaaattgcaagtaatataaggaaaggtttttatgaggaagctaaaaaagcagccctg
cggctaaaggatatattcggtgagaataatttctttttagaactgcaggatcatggaata
ccggaacagaaatcagtaaaccagggattactgagaatgagtaaggaaacaggaatccct
ttggtagccaccaacgacgttcattatactttggaaagtgatgccgccgcccatgatatc
ttgctgtgtatccagacccagaagaaagtaacggatgaaaaccgcatgcgttatgagggc
ggacagtatttcataaaatcaccggaagagatgttaaaaattttcccttatgccacagaa
gcattggaaaatacccacaagatagcagagcgctgtcacgtggaaattgagttcggcgag
tataaacttccgaaatttgatgtaccggctgggattaccgcattggagtatttaaaaaaa
ctatgttatgaaggattaaataaaagataccccaatccctcccaggaattaatagaccgc
ctggattatgaaattgaaaccatccgcagcatgggatttgtggattacttcttaatcgta
ggtgattttataaaatatgccagagatcatgaaattatggtcggaccgggaagaggaagt
gccgccggaagtatcgtatcttactctctgggaataactaatattgatccgatcaaatat
aacttattgtttgagcgttttttgaatccggaacgtttaaccatgcccgatatcgatatt
gatttctgctttgaaagaagacaggaagtaatcgattatgttgttgaaaaatacggcaaa
gaccgggtggttcagattgtgacgtttggtaccatggctgcaagagctgttatccgtgat
gtgggacgtgctctggatttaggatacggcagagtggatacggtagctaagatgattccc
actgagcttggtatcactatagaaaaggcattaaaacttaacccggatctgaaaacctta
tacgacaatgatgatgatataagaaacttaattgacatgtccaaacgtctggagggtttg
ccccgccatacttccatgcatgcggctggagttgtaatcagtaaagctcccgtgatggaa
tatgtacccctctcccgggcttccgacgattccatcaccacccaatttaccatgacaacc
ctggaggaactgggacttcttaagatggactttttaggccttagaaccttaactgttatt
cagaatgcggtccgtctgataaataaaaggcgtaatgagggagagaaaatagatatcgat
aacatcgattacaatgataaaaatgtatatgctttatttgcctccgctaaaacagacggc
atattccagtttgaaagtgcaggaatgaaaaacttcctgaaagaattaaaaccaagcaac
ctggaggatatcattgcaggtaatgcactctaccgtccgggcccaatggattttattcca
aaatatatcaaaggtaaaaatcaggcaggcagtattatctatgagtgccctcagctggaa
cccatcctgtctccaacctatggctgtatcgtttatcaggagcaggttatgcagatcgtt
cgtgacttggcagggtacagttatggcagaagtgacctggtacgccgtgccatgtcaaaa
aagaaagcttccgttatggaaaaggaacggtacaatttcgtatacggtaacgatgaagaa
aatgttcctggctgtatcaaaaatgggatatcagaagaagttgcaaaccacatatttgat
gaaatgacagactttgcgaaatatgcttttaataagtcccatgcggctgcttatgcagtt
gtagcttatcagacagcatttttaaaatgttattatccggttgaatttatggctgcttta
atgacttcggtaattgataatccaggaaaggtggcagaatatatttttacctgcagacag
atgggtattaaaatacttccgccggatattaatgaaggagacagtactttttccgtatcg
gagggcgctatccggtatggactatccgcaataaaaggtcttgggcgcccggttattgaa
gcagtagtaaaggaacgggaaagtaatggtaaattcaccagcttaagagattttgcagaa
cggctgtccggcaaggaagtaaataaaaggactgttgaaagttttatcaaatccggtgct
tttgacagcttacaaggtaccagaaaacagttaatgatgatttatgtgcaggtacttgat
gatgtggctcagaccaaaaagcgtaatctgtcagggcagatgtcattatttgattttgca
gaggaagaggagaagacggagtatgagaataatcttccggatgtaggggaatataccatt
gaacaaaagctttcctttgagaaagaagttatgggtatctatgcaagcggtcatccactg
gaagcctatggggaattaatgaagaaaaatataacggcaactaccatggattttgttatc
gatgaagaaacgaatgaaacgaaagtaaatgatggagagatggcaaccgtaggtggtatc
attacagggaaaaccgtaaaaaccacaagaaccaattccatgatggctttcgtcactctg
gaagatatggtgggagctgttgaaattattgtatttcctaaagattatgataaatataaa
atgcttcttgtagaggataataaagtactggtaaggggaaaaatagcagtagaagaagaa
aaaaatgctaaattaatctgccagacgattattccttttgaaagtattcccaaagttatt
tggataaagtatcccaataaagagaaatttgttgaagatgaacagaggctgtatacgata
ttaagggaatatgatggtacggatagtgtatgtatttatctggaatgtgaaaaagcaata
aaacacttacctaaaagtatgggtattaaggcggaaatagagcttattgataaactaaaa
cagacatattcggaagcaaatataaaagtaattgaaaatagtattgaaaaagctagaaaa
atagattaa
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