Anaerocolumna sedimenticola: Ana3638_12030
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Entry
Ana3638_12030 CDS
T06399
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
anr
Anaerocolumna sedimenticola
Pathway
anr03420
Nucleotide excision repair
anr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
anr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ana3638_12030
03430 Mismatch repair
Ana3638_12030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anr03400
]
Ana3638_12030
Enzymes [BR:
anr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ana3638_12030
DNA repair and recombination proteins [BR:
anr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ana3638_12030
MMR (mismatch excision repair)
Other MMR factors
Ana3638_12030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QHQ61414
UniProt:
A0A6P1TJY6
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All DBs
Position
2721488..2723644
Genome browser
AA seq
718 aa
AA seq
DB search
MADTLLNGLNEEQIQAVTATEGYIRVIAGAGSGKTRALTHRFTYLVNELGIAASNILCVT
FTNKAANEMKKRIRYMIGDNDTGFICTFHGFCVQVLKEEIHVLNYPKNFLIIDTEDVTAI
LHTIFEDMGLNSRNYTFSTITDMIAVRKEKEPYLAYILETNNDVLKEKFLTAESKEDAIF
YRYLYEQKKCYALDFDDLINYVLYIFENHEEIKLKWQKKLEYVMVDEFQDVSPKQYMLSK
LLSGYHHNLFIVGDPDQTIYSWRGANVEFILNFDKAFPTAKTIIMNKNYRSTPNIIQASN
SLIEKNKRRIEKSLVPIKQADIPVIYNHMKTTQLEAEWIAAQIKKIQEGGISLKNIAILY
RSHFVSRSFEEVFIKENIKYTIYSGIEFYKRKEIKDVLCYLRMILYSDDISFNRIVNIPK
RNIGEKRMTFLKEYAGNHSCSLYQALQDNLEDNLFKKTNGKDFTALIEKYKQLYEEKKIS
EVLSDILNDSGYEALLRTDGEQERLDNLAELKQSIFDYENSAGEECTLADYLEKISLFTN
LDQKENSDSVQMMTIHTAKGLEFPYVFVCGLNEGIFPSKHIDTSDKMEEERRLAYVAFTR
AENTLFLSDAEGVNYDGSYRYPSRFIFNIEKTYINYMVELESRLASDARMYIQLNEQKME
QNSRCLAINDLVEHHVFGKGKILDINHDTSSYVIKFENMETTRNISFKIMLEYAGHEE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatactttattaaacgggttaaatgaggaacaaattcaggcagtaacagcaaca
gagggctacataagggtcatagcaggcgcgggttccggtaaaaccagagcattaactcat
cggtttacctatctggtgaacgagctgggaatagctgcttccaatatactctgtgttaca
tttaccaataaagcagcgaatgaaatgaaaaagagaatacgttacatgattggtgataat
gatacgggatttatctgtacttttcatggcttttgcgtacaggtactgaaagaagagatt
catgtactaaactaccctaagaattttctcattatcgacacggaagatgtaacggccatt
ctgcatactattttcgaagatatggggttaaattccaggaattatactttcagtacaatc
actgatatgatagcggttagaaaagaaaaagaaccttatttagcctatattttagagacc
aataatgatgttttaaaggaaaagtttttaacggccgaaagtaaggaagacgctatcttt
tatcgttacctttatgagcagaagaaatgttatgccctggattttgatgatttgattaat
tatgtattatacatatttgagaatcacgaagaaatcaaactcaagtggcagaaaaagctg
gaatatgtaatggttgatgagtttcaggatgttagcccaaagcaatatatgttatcaaaa
ctgttaagtggctatcaccataatctctttattgtgggtgacccggatcagactatttat
tcctggcggggagccaatgtggaatttatactaaattttgataaagcatttccaaccgcc
aagacgattatcatgaataaaaattaccgctcaacacctaatataattcaggcttccaat
tctttaatcgagaaaaacaagcggcgtattgagaaaagtctggtacctataaaacaggca
gatataccggttatctataaccatatgaaaacgacccagttggaagcggaatggatcgca
gcccagataaagaagatacaggagggtggcattagtcttaagaatattgcaatattgtac
cgctcccatttcgtatccagaagttttgaggaagtatttattaaagaaaatattaaatat
acaatttacagtggaatcgaattttataaacggaaagaaattaaagatgttttatgttat
ttgagaatgattctttattccgatgatatctcatttaaccgtatcgtaaacataccgaaa
agaaatatcggagaaaagcggatgacatttttaaaagagtatgccggaaatcattcctgt
tctttgtatcaggctttacaggataatctggaggataacctgttcaaaaaaacaaatggg
aaagactttacggctttgatagaaaaatataaacagctttacgaagaaaagaaaatctcg
gaagttttatcagatatattaaatgacagcggttatgaagctttgcttcgtacggatgga
gagcaggaaagactggataatttagccgaattaaaacaatccatttttgattatgaaaat
tcggcaggtgaagaatgtaccctggcagattatttagagaaaatatccttatttaccaac
ctagatcaaaaggagaattccgattccgtacagatgatgaccattcatactgcgaaagga
ctggagtttccttatgtatttgtttgcggtttgaatgaaggaatcttcccgagtaaacac
attgatacttcggataagatggaggaggagaggcggcttgcatacgtagcgtttacccgt
gctgaaaataccttgttcttaagtgatgcggaaggagttaattatgatggatcttaccgt
tatccgtcccgttttatttttaatatagaaaaaacttatatcaactatatggttgagtta
gaaagcaggctggcaagtgatgcaaggatgtatatccagctgaatgagcagaaaatggaa
cagaacagccgctgtcttgcaatcaatgatttagttgaacaccatgtttttggaaaaggt
aagatattagatataaatcatgatacgtcatcttacgtcatcaaatttgaaaatatggag
acaacaagaaatatcagttttaaaatcatgcttgagtatgcggggcatgaagagtaa
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