Anaerocolumna sedimenticola: Ana3638_13465
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Entry
Ana3638_13465 CDS
T06399
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
anr
Anaerocolumna sedimenticola
Pathway
anr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
anr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ana3638_13465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anr03000
]
Ana3638_13465
Transcription factors [BR:
anr03000
]
Prokaryotic type
Helix-turn-helix
Other families
Ana3638_13465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
HTH_3
TPR_1
TPR_2
CFAP70_TPR_C
TPR_8
DUF7017
Motif
Other DBs
NCBI-ProteinID:
QHQ61657
UniProt:
A0A6P1TMV8
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All DBs
Position
3037927..3039099
Genome browser
AA seq
390 aa
AA seq
DB search
MKNITGLQIKMNREKMGFKQEYLCKGICAVSYLSKIEKGSIIPSDDIIKMLFKRLHIEFY
QDEVFIKEGKEEFEKLYQSQYTGLPVDYKKIIEIKSEKEKYLNSPLYIDYQLFELSEKPK
DSTQILNLKEYMDTEQLYKAYYFAGLVYGDMNLLFEAKKLKYAPEVLYGMGYVKWQEGKY
YEAIELLLESLNLAYSKGYIKLQMIICLILGHIYMDFHLPTMEKYYEKVLLLSKLVKDDS
MDYLLHYHIGIAYTAKNFTKAEDNLQKAIETCPADEKDGLEKIYQKLCFLYVRYNQMEKA
KDYYKKAIDINHFESVNELIKIMVEEEDYIHQKSYINQLSAIYKQSKKHNIFSNTKYYGD
FLIETYKANRRYKEALEVTEYLYAFLTQDN
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatataacaggtctgcaaataaaaatgaatagggaaaaaatggggtttaaacag
gagtatttatgcaaaggtatctgcgctgtttcctatctttctaaaatagaaaaaggaagc
attataccaagtgatgatataattaaaatgctttttaagcgtttgcatattgaattttat
caggacgaagtatttataaaagagggtaaggaggagtttgagaagctttatcagtcccaa
tataccggattacctgtggattataaaaaaatcatagaaataaaaagtgagaaagaaaaa
tatctgaattcgccactttacatagattatcaactttttgagctgagtgaaaaaccgaaa
gatagtacacagattttaaacttgaaagaatatatggatacagaacagctttataaggca
tactattttgccggattagtatatggtgatatgaatctgctttttgaggcaaaaaaatta
aaatatgcacctgaagtgttatatggtatgggttatgtaaaatggcaggaaggtaaatat
tatgaagccatagaattattactggagtcacttaatttagcttattccaagggatatatt
aagcttcagatgattatctgcttaatactcggacatatctatatggattttcatttacct
accatggagaaatattatgagaaagttcttttattatcaaaattagtgaaagacgattcc
atggattacttattgcattatcatattggaattgcttatacggcgaagaatttcacgaaa
gcggaagataatctgcaaaaagctattgaaacttgtcccgctgatgaaaaggatgggttg
gaaaagatatatcaaaaactttgcttcttgtatgtcagatataatcaaatggaaaaagca
aaagattattataagaaagcaatcgatatcaaccattttgagtctgtaaacgagcttatt
aagataatggtggaagaagaggattatatccatcaaaaaagttatatcaatcagctgtct
gcaatttacaagcagtctaaaaaacataacatattttctaacactaaatattacggtgat
tttttaatcgaaacatataaagcaaaccgtagatataaagaagctcttgaggtaacggaa
tatctctatgcgtttttaactcaggataattaa
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