Anaerocolumna sedimenticola: Ana3638_18140
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Entry
Ana3638_18140 CDS
T06399
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
anr
Anaerocolumna sedimenticola
Pathway
anr03030
DNA replication
anr03430
Mismatch repair
anr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ana3638_18140
03430 Mismatch repair
Ana3638_18140
03440 Homologous recombination
Ana3638_18140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anr03032
]
Ana3638_18140
03400 DNA repair and recombination proteins [BR:
anr03400
]
Ana3638_18140
Enzymes [BR:
anr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ana3638_18140
DNA replication proteins [BR:
anr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ana3638_18140
DNA repair and recombination proteins [BR:
anr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ana3638_18140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NI
tRNA_anti-codon
HHH_6
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QHQ62466
UniProt:
A0A6P1TRT5
LinkDB
All DBs
Position
complement(4076905..4081440)
Genome browser
AA seq
1511 aa
AA seq
DB search
MGMLFFEVFDQLSELPKDLVNLFQEVIVEKVSVSKSTAEVKIYMQSNRLLQRQIIKKMEY
QIKKQLFASAPNSVVLCDNYILSAQYTPEKLFDIYQNSILEEFRERSILEYNVFELAEIT
FEENVLIFKCEENFLIRKISGDIIKHITDIYKNRFHFDVTVRFEYYEPEKKEEADKPEYE
FVTRTGGISYKNTSSYARAEQNNADDLAAAAYIQERNEIQMSQGGETVKSSNENKTVSKE
TTGDNKNSKSKTPYDKNKYSYKKAINDPDTIYGKGFDGEAVPISDVQDEIGEVVIRGKIL
NVEARELRNEKTIIIFTVTDFTDSIQGKIFLKTEESAEVISVLKKGQFIKLKGMALMDKY
DHEVTIGSIVGIKTIPDFTTTKMDTSPVKRVELHAHTMMSDMDAVVDVKDLVKRAFAWGH
KAVAVTDHGVVQSFPEANHTLSKKDYPESEWDRLKEFKVIYGVEAYLVDDLKEIVVNQKG
QSLDDSYVVFDIETTGFGPVKDKIIEIGAVKVVNGEIIDKFSTFINPEIPIPYEIEELTG
IKDEMVLDYPTIDIILPKFLEFCSGSALVAHNANFDVSFIIKKSEELGIETDYTVIDTVG
LARILLPDLSKYKLNHVAKALNISLENHHRAVDDAGATAEIFVKFIAMLKDQDIHTIDEI
NTLGKLSPDAIKKLPTYHAIILARNDIGRVNLYKLISLSHIEYYSKRPRIPKSLFMENRE
GLLIGSACEAGELYQAILREQPPEEINRLVNFYDYLEIQPLGNNEFMIRSDKININSKEE
LMDINRRIVKLGEESSKPVVATCDVHFMDPEDEIYRRIILAGKGFKDADDQAPLYFRTTE
EMLEEFMYLGRDKAYEVVITNTNKITDMIEKISPVRPDKCPPVIEDSDKTLREICYNKAH
SMYGPNLPKQVEERLEHELHSIITNGFAVMYIIAQKLVWKSNEDGYLVGSRGSVGSSFVA
TMSGITEVNPLAAHYYCTNCFYSDFDSEEVKAYSGSSGCDMPDKLCPVCGKPLSKDGHDI
PFETFLGFNGDKEPDIDLNFSGEYQSKAHDYTEVIFGKGHTFRAGTIGTLADKTAYGYVL
KYYEERGQHRRRAEIERIVSGCVGVRRTTGQHPGGIIVLPHGEEIYSFTPVQRPANDMTT
KTITTHFDYHSIDHNLLKLDILGHDDPTMIRMLEDLTGLDAKTIRLDDEKVLSLFDNLSA
LNLKPEDLGGCDLGCLGIPEFGTDFVMQMLRDTKPKNFSDLVRISGLSHGTDVWLNNAQT
LITEGKCTLGTAICTRDDIMTYLIHTGVDSGHSFKIMESVRKGKGLTPEMEEEMLAAGVP
DWYIWSCKRIKYMFPKAHAAAYVMMAFRIAYFKVYYPLAYYAAYFSIRASAFNYELMCLG
RERLERYMADYKRRSNELSKKEQDSLKDMKIVQEMYARGFEFIPIDIYRAKAHHFQIIDN
KLMPSLSTIDGLGDKAADAVVEAVGDGKFLSRDDFRSRCKVSSTVVDLMVDLDLLGDLPI
SNQISLMDFLQ
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgcttttttttgaagtctttgaccagttgtcagagcttccaaaagatttagtg
aatctttttcaagaagttatagttgaaaaagtgtccgtatctaaatctactgcggaagtg
aaaatatatatgcagagtaatcggctgttacaaagacagattattaaaaaaatggaatat
caaattaaaaaacagctttttgcttcagctcctaattctgttgtattatgtgataattac
atattatctgcacaatatacaccggagaaattatttgatatttaccaaaacagtatatta
gaagaatttcgggaaagaagcattttagaatacaatgtttttgaattagctgaaattact
tttgaagaaaatgtccttatttttaaatgtgaagaaaactttcttatcagaaaaatatca
ggtgatatcataaaacatataacggatatatataaaaaccggttccatttcgatgttaca
gttcgttttgaatattatgaaccagagaaaaaggaggaagccgataaaccggaatatgaa
tttgttaccagaacaggcgggattagttataaaaatacctcttcttatgccagagcagag
caaaataatgcggatgatttggcagccgccgcttatatacaggaacgaaacgaaattcaa
atgtctcagggaggagaaacagttaaatcatcaaacgagaataaaactgtttctaaggaa
accaccggtgataataaaaatagtaaatcgaaaactccctatgacaaaaataaatacagt
tataaaaaggcaattaatgatccggacaccatctatggtaaagggtttgatggagaagca
gtacctatttcggatgttcaggatgaaataggagaagttgttatccgtggtaagatatta
aatgtagaagccagggaacttagaaatgaaaaaaccattattatctttaccgttacagat
ttcactgattccattcagggtaaaatttttcttaagacagaagaatcggcagaagtaatc
agtgtgttaaaaaaaggccagtttataaagcttaaaggtatggctttaatggataaatat
gaccatgaggttactatcggttctattgtaggtattaagacaattccggattttactaca
accaagatggataccagtcctgtcaaacgtgttgagcttcatgctcataccatgatgagt
gatatggatgctgtagtagatgtcaaagacctggtaaagagagcatttgcgtggggccat
aaagcggttgcggttacggatcatggagtagtacaatcttttccggaagcgaatcatacg
ttaagtaaaaaagattatccggaatctgaatgggacagacttaaagaatttaaagtaatc
tatggtgtagaagcatatttagttgatgatttaaaggaaattgttgtgaatcaaaaggga
caatccctggatgattcttatgttgtattcgatatagaaacaacagggtttggcccggta
aaggacaagattatagaaataggagcggtaaaagtagtaaacggtgagattattgataaa
ttcagtactttcattaatccagaaataccgattccatatgaaattgaagaactcaccggt
ataaaagacgaaatggtgttagattatcctaccattgatataattttacctaagttttta
gagttttgttcaggaagcgctttagtagctcacaatgctaattttgatgtcagttttatt
ataaaaaaatccgaagaactgggaatcgaaacagattataccgttatagatacggttggt
ttagcccgcattcttttgccggatttaagtaaatataaattaaatcatgtggcaaaagct
ttaaatatttctctggaaaatcatcaccgtgcggtagatgatgccggtgcgacagcagaa
atctttgttaagtttattgccatgttaaaggaccaggatatacatacgatcgatgaaata
aatactttgggtaagttatcaccggatgccataaagaaacttcccacttatcatgctata
attttagcaaggaatgatattggaagagttaacttatataaactaatatcactttctcat
attgagtattatagtaaacggccccgtataccaaaaagtttatttatggaaaacagggag
ggtttgcttatcggttctgcctgcgaagcgggagaattatatcaggctattttaagggaa
cagccgccggaagaaattaacagactggtaaatttttatgattatttggagatacagcca
ttaggtaataacgaattcatgataagaagtgataaaataaatattaattcaaaagaagaa
ttaatggatattaaccgcagaattgtgaaattaggcgaagaatcgagtaagccggtagtt
gctacctgtgacgtacattttatggatccggaggacgagatataccgtagaatcatttta
gccggtaagggatttaaggatgcggatgaccaggcgccattatatttccgtacaaccgag
gaaatgctggaagaatttatgtatttaggcagagataaagcgtatgaggtcgttattacc
aataccaataaaattacagatatgattgaaaaaatttctcccgtacgtccggataaatgc
cctccggtaattgaagattctgataaaaccctgagagaaatctgttataataaagcgcat
tccatgtatggtccgaatctgccgaaacaggtggaagaacgtttggaacatgagctccat
tctattattaccaatggttttgccgttatgtatattatagcgcaaaaacttgtttggaaa
tccaatgaagacggatatctggtaggttccagaggttccgtaggttcctcctttgttgct
actatgtcaggtataaccgaggttaatccgttagcggcccactattactgtacgaactgc
ttttattcggattttgattccgaagaagtaaaagcatattccggcagttccggatgtgat
atgcctgataaactatgtccggtatgcggaaaacctttaagcaaagacggccatgatata
ccttttgaaactttcttaggatttaatggagacaaggaaccggatattgatcttaacttt
tccggtgagtaccagagtaaagctcatgattatacggaagttatatttggtaaaggacat
actttccgtgccggaaccatcggtacgctggctgataaaaccgcgtatggatatgtttta
aagtattatgaggaaagaggtcagcatagaagaagggcggaaatcgaacgtattgtatcc
ggctgtgtcggagtcaggagaactaccggccagcatccgggaggtattatcgtattgcct
cacggagaagaaatctattcctttacaccggtacagcgtccggctaatgatatgacaacg
aaaacgataaccactcattttgattatcactccattgaccataatcttttaaaactggat
attctggggcacgatgatccgaccatgattcgtatgttggaagatttaaccggattagat
gcgaaaaccatcaggcttgatgatgaaaaggttttatccttatttgacaacttaagtgca
ctgaatttaaaacctgaggatttgggaggatgtgatttaggatgtcttggtattccggag
tttggtacggatttcgttatgcagatgcttcgtgatacgaaaccaaagaatttctccgat
ctggtaagaatatccggactatcccatggtaccgacgtttggctgaataatgcccagaca
ttaattacagaaggaaaatgtacccttggaacagcaatctgtacccgcgatgatatcatg
acatatctcattcacaccggggtagacagcggccactcctttaaaataatggaaagtgta
cgtaaaggtaaaggccttaccccggaaatggaagaagaaatgcttgcagcgggagtaccg
gactggtacatctggtcctgtaagcgtattaaatatatgttcccgaaagcccatgcggca
gcttacgtaatgatggcattccgtatcgcttattttaaggtatattaccctttggcttat
tacgctgcttattttagtatccgcgcctctgcatttaactatgaattaatgtgtcttggc
cgtgaaaggctggaacgttatatggcggattataagagaagaagcaacgaattatccaag
aaagaacaggatagtttaaaagatatgaagattgttcaggagatgtatgccagaggtttt
gaatttataccaattgatatttacagggcaaaagctcatcattttcaaataattgataat
aaattaatgccctccttaagtaccatagacggactgggtgataaagcggcagatgcggtt
gtagaagcagtaggtgatggtaaattcctgtccagggatgatttcaggagccgctgcaag
gttagttctacagttgtagacttgatggtggacttagatttattgggtgatttaccgatt
tccaatcagatttccttaatggattttttacagtaa
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