Anaerocolumna sedimenticola: Ana3638_18675
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Entry
Ana3638_18675 CDS
T06399
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
anr
Anaerocolumna sedimenticola
Brite
KEGG Orthology (KO) [BR:
anr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anr03400
]
Ana3638_18675 (sbcD)
DNA repair and recombination proteins [BR:
anr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ana3638_18675 (sbcD)
Archaeal homologous recombinant proteins
Ana3638_18675 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
zf-C3H2C3
Motif
Other DBs
NCBI-ProteinID:
QHQ62556
UniProt:
A0A6P1TS27
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All DBs
Position
complement(4210981..4212135)
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AA seq
384 aa
AA seq
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MKFLHISDLHIGKKLREADFTEDQIHILNEIISIVDDTKPDGIFIAGDIYDRSVPPASAV
NLFDDFLTNLEKRNIMVFIVSGNHDSPERLNFGKEIMGKNSIYISGAFKGEMDRITLSDE
YGQVNIYLLPYIKPSIVSNFIKETELDTYEKAVQAVFESAKIDREQRNILVAHQYVTNQG
IEPERSDSEVISVGGLDNIDVSVFDPFDYVALGHIHGPQKIGRETVRYCGTPLKYSFSEC
KHQKSVTCIVITHKNNVEISQIPLHPIRDLRVIKDKLDHLLHDEKYINKNCEDYIHAILT
DEEDIYDAIGKLRTVYSNVLILEKENTKTKNNENSKTSASGDVTKRSPMDLFEEFYQNQN
NIELNNIQKRILMDLFTELGGEAE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttttacatatatcagatcttcatatcgggaaaaagctgcgggaagcggatttt
accgaagatcagattcatatattaaacgaaataatcagtatagttgatgatacaaaaccg
gacggaatctttattgccggtgatatttatgatagaagtgtacctcctgcaagtgcagtg
aatctatttgatgattttttaacaaacttagaaaaacgaaatataatggtatttattgtc
agcggtaatcatgattcaccggaacgtttaaattttgggaaagagatcatgggtaagaac
agtatttatatttcaggggcttttaaaggtgaaatggaccgtataacactatcagatgaa
tatggtcaggttaatatttatctgctcccttatataaagccttctatagtttcgaatttt
ataaaagaaacagaacttgatacctatgaaaaagctgttcaagctgtttttgagtcagcg
aagatagaccgggaacagaggaatatccttgttgctcatcaatatgtaacgaatcagggg
attgaaccggaacgctcggattctgaggttatatctgtgggaggacttgataatattgat
gtatcggtatttgatccttttgattatgtagcgctgggacatattcatggtcctcagaaa
attggaagggagacggtacgttactgtggaactccgttaaaatactccttttctgaatgc
aaacatcaaaagtccgtaacctgtattgttattacccataaaaataacgttgagatctct
cagatacctttgcatccaatccgggatctgcgtgtaataaaagataaactggatcatttg
cttcatgatgaaaaatacattaacaaaaactgtgaggactatatccatgccatattaacc
gatgaagaggatatctatgatgcgatcggaaaacttagaacagtatatagtaatgtatta
atcctggaaaaggaaaatacaaaaacaaaaaacaatgagaattccaaaacctcagcttcc
ggcgatgtaacgaaacgaagtccaatggatttatttgaagaattctaccagaatcaaaac
aatattgaattaaataatatccaaaaaagaatattgatggatttatttacggagcttgga
ggtgaagcagaatga
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