Anaerocolumna sedimenticola: Ana3638_18925
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Entry
Ana3638_18925 CDS
T06399
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
anr
Anaerocolumna sedimenticola
Pathway
anr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
anr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ana3638_18925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anr03400
]
Ana3638_18925
Enzymes [BR:
anr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Ana3638_18925
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Ana3638_18925
DNA repair and recombination proteins [BR:
anr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ana3638_18925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
Fapy_DNA_glyco
NFACT_N
Antimicrobial20
Motif
Other DBs
NCBI-ProteinID:
QHQ62596
UniProt:
A0A6P1TS76
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All DBs
Position
4266113..4266943
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AA seq
276 aa
AA seq
DB search
MLELPESYSISKQINQTLKGKLIKNAVANSSPHKFAWYFGDPSNYRFLLTGQSIKEAKAV
AGQVELYAGDIRILFSDGVNIRYFEKRDKIPAKHQLRIDFEDDSSLVCCVQMYGGLWVYH
EGENENPYYLVAKRKPSPLSTDFSKSYFDTMFQEENKKNLSAKAFLATEQRIPGLGNGIL
QDILFHAKIHPKRKIDTLARDETNGLFDAVKTVINRMAKDGGRDTEKDLFGKNGGYHTIL
SKNTAGKPCPVCGTLIKKEAYLGGSIYLCEGCQRLS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctggagctaccagaaagttattctatttccaaacagattaaccaaactctgaaaggc
aaactaattaaaaacgcagttgctaattcatcaccccataaatttgcctggtattttggt
gatccgagtaattaccggtttttacttactggccaaagcattaaggaggcaaaagcagtt
gcgggtcaagtggaactatatgccggtgacatacggatattattcagcgacggtgtgaat
attcgttattttgaaaaaagggataaaataccggctaaacatcaactgaggattgatttt
gaggatgattcatccctggtctgttgtgtccagatgtacggaggtttatgggtctatcat
gaaggtgaaaatgagaatccctactatctggttgccaaaaggaagccctctcctttaagt
accgatttctcaaagtcctattttgacaccatgtttcaggaagagaataaaaaaaatctc
tccgctaaagcctttttagcaacggaacagcgtattccgggacttggaaatggtattttg
caggatatattatttcatgcaaaaatacaccccaaaagaaaaatagataccctggcaagg
gatgaaactaacggattgtttgatgctgtaaaaacagtaattaataggatggcaaaagac
ggcggacgtgatacggaaaaagatttgtttggcaaaaacggcggatatcatacgatatta
agtaaaaataccgccggtaagccttgccctgtatgtggtaccttaattaaaaaagaagcc
tatttaggcgggagtatttatctttgtgaaggctgccagagattgtcctga
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