Anaerocolumna sedimenticola: Ana3638_21550
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Entry
Ana3638_21550 CDS
T06399
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
anr
Anaerocolumna sedimenticola
Brite
KEGG Orthology (KO) [BR:
anr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
anr03016
]
Ana3638_21550 (thpR)
Enzymes [BR:
anr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Ana3638_21550 (thpR)
Transfer RNA biogenesis [BR:
anr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Ana3638_21550 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
PAS_3
Motif
Other DBs
NCBI-ProteinID:
QHQ63049
UniProt:
A0A6P1TS43
LinkDB
All DBs
Position
complement(4826841..4827395)
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AA seq
184 aa
AA seq
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MKDLLRLFIAINFSDDIKLNLFQLTEILKKNTSRGHFTARENFHLTLAFIGETKDKEHVI
EAIDNAVEKGKIHAFQLEFGGFGRFKGRDGDIFWVGVKKHPVLTESNNELIRELKTFEFK
VDDKEFKPHLTLGRGIVLKNGYTIKDFEQIIPPMTMTVKEIGLMKSERINGRLVYTEVYH
KNLL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaggctttttattgcaattaatttttcggatgatataaaattgaat
ttatttcagttaacggagatacttaaaaaaaatacttcccgtggtcatttcactgccagg
gaaaattttcatctcacccttgcttttattggagaaacaaaagataaggagcatgtgatt
gaggcgattgataatgcagtcgaaaaagggaagattcatgcgtttcaattagaatttggc
ggttttggcagatttaagggaagggatggagatatcttctgggtaggtgttaaaaaacat
ccggttttaacggaatcaaataatgaacttatcagagaacttaaaacttttgagtttaaa
gtagacgataaggaattcaaaccccatctaaccctgggaagaggtattgtgcttaaaaac
ggatatacgatcaaagattttgaacaaattataccacctatgactatgacagtaaaggaa
atcggattgatgaagtcagaacggataaatggcagattggtttataccgaagtttaccat
aaaaatttgttatga
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