Anaerocolumna sedimenticola: Ana3638_22710
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Entry
Ana3638_22710 CDS
T06399
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
anr
Anaerocolumna sedimenticola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PrpR_N
Sigma54_activ_2
Sigma54_activat
HTH_8
HTH_Tnp_ISL3
HTH_7
HTH_24
HTH_23
HTH_22
HTH_11
HTH_29
AAA
Phage_NinH
HTH_10
YdaS_toxin
HTH_28
HTH_IclR
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QHQ63238
UniProt:
A0A6P1TUS3
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Position
5083869..5085665
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AA seq
598 aa
AA seq
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MQNTKIKVLGIAPYEAMKTAMQKIADVRNDIELDVYAGDLNYGVEIVRHNIQNNYDAIIS
RGGTAEMIGRMTNIPVVEITLSVYDILRAIKLAENYSDHYAIIGFPSITESAHLLCSLLQ
YKLDIVTAHSEEEVISTLTQLKQDGYHMVIGDMITHTTAKNLGLNAILITSGTESIVSAF
DQAVKISTSYLQIKQENKFLKEVIDKEGSKTIIFSEKGEIYLSTWDQENAEGLYMMLRVE
IPQIISSDNHKMFRNINGILFSIIGRLIDYQKQTYIVYYVTASKIPIANSKYGINFFNKK
EAEEQLFNSFYSITGAMGGLQDSINQLSLSSFPVMLTGENGTGKEQIAFIIYTHSPHQTT
PFVTIDCELLNDKSWEYLTNHYNSPFNDNNNTIYFKSIETLSKERSQLLLSLIIDINLSK
RNRLIFSCTTNRDALIPAVGQEFVKRLSCLTICPAPLRERAMEIPSLSSIYLGSLNVEMG
KQLIGFEPKAMELLQEYDWPQNYTQFKRLLNELATLTTTPYITSLSVMELLDKERNTIGS
GYSSAPDSKFSLNLNRTLDEITHDIILQVLAGKKGNQSAVAKQLGISRTTLWRYLNRL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataccaaaataaaagttctggggattgctccttatgaggctatgaagactgcc
atgcaaaaaattgcagatgtgcgaaacgacattgaactggatgtatatgccggggatttg
aattatggggttgaaatagtacgccataatatacagaataattacgatgccattatctcc
cgtggaggaaccgcagaaatgatagggcggatgacaaatatccctgttgtggagattacc
ttatccgtttatgatattcttcgtgctattaagctggctgaaaattattcagaccactac
gccatcatcggttttccaagtattacagaaagtgcccacctgctctgttccctgctgcag
tataagctagatatcgtcactgctcacagtgaagaagaggtaataagtactctaacccag
ttaaagcaagatggataccatatggtaataggtgatatgattacccatactacagcgaaa
aacctggggctaaatgctattctgatcacatccggcacggagagtatcgttagtgccttt
gatcaggccgttaaaatcagtaccagttatctgcaaataaaacaggaaaataaattctta
aaagaagtaattgataaagaaggaagcaaaactatcattttctctgaaaaaggtgaaatt
tatctttcaacctgggatcaagaaaatgcagaaggattatatatgatgctccgcgttgag
attccccagataatatcatccgataaccataaaatgttccgaaatatcaacggtatactt
ttctccattattggacggttaatcgattatcaaaaacagacgtatattgtttattatgtt
acggcttctaaaattcccattgcaaatagtaaatatggaattaattttttcaataaaaaa
gaagctgaagaacagctttttaacagcttctatagcatcaccggcgcaatgggcggtctt
caggattctattaatcagctcagtttaagttcctttcctgtaatgctaacgggggagaac
ggtacgggcaaggaacagattgcatttattatatacacgcatagcccacatcagaccact
ccctttgtaaccatagattgtgaactgctcaacgataaaagctgggagtaccttacgaat
cactacaactctccttttaatgataacaataataccatttattttaaaagtatcgaaacc
ctttccaaggaacgcagtcagctgttattatccctgattattgatattaacttaagcaaa
cggaaccggcttattttttcctgtaccactaaccgtgacgccttgattccggctgtaggg
caggaattcgtcaaacgtctctcctgtctgactatttgcccggctcctctaagggaacga
gctatggaaataccaagtctgtccagtatctatcttggctctctgaacgtagaaatgggt
aagcagctcatagggtttgaaccaaaagctatggaactgctccaggagtatgactggcct
cagaattatacccaattcaaacgcctgcttaatgaacttgccactcttaccacgacccca
tatattaccagcctatccgtaatggaactactggataaggaacgtaataccataggaagc
ggctacagctcagcacctgacagtaaattttccctgaacttaaaccgtactctggatgag
attacacatgatatcattcttcaggttcttgcaggaaaaaagggaaaccaaagtgccgta
gccaaacagctgggtatcagcagaaccacgttatggagatatttaaaccgtttataa
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