Arsenophonus nasoniae: ArsFIN_03490
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Entry
ArsFIN_03490 CDS
T05992
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ans
Arsenophonus nasoniae
Pathway
ans03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ArsFIN_03490 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ans03019
]
ArsFIN_03490 (deaD)
03009 Ribosome biogenesis [BR:
ans03009
]
ArsFIN_03490 (deaD)
Enzymes [BR:
ans01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ArsFIN_03490 (deaD)
Messenger RNA biogenesis [BR:
ans03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ArsFIN_03490 (deaD)
Ribosome biogenesis [BR:
ans03009
]
Prokaryotic type
rRNA helicases
ArsFIN_03490 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_22
DRTGG
Motif
Other DBs
NCBI-ProteinID:
QBY41820
UniProt:
A0A4P7KTM5
LinkDB
All DBs
Position
complement(369395..371227)
Genome browser
AA seq
610 aa
AA seq
DB search
MTNETEISFADLGLSTPILSALNDLGYEKPSPIQQQCIPYLLDGCDVLGMAQTGSGKTAA
FSLPLLHNIDITLKAPQILVLAPTRELAVQVAEAMGEFSKHMRSVNVVALYGGQRYDSQL
RALRQGPQIVVGTPGRLLDHLKRGTLNLSHLRGLVLDEADEMLRMGFIEDVENIMSQIPS
EHQTALFSATMPEAIRRITRRFMKSPKEISIQSSVTTRPDITQSYWSVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERSGYNSSALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRAILFVDNRERRLLRN
IERTMKQPITEVELPSAAVLSERRQAKFAENIQKQLESGDLEKYRALLTKLVANDELDME
TLASALLKMAQGDRPLILPPDPVRRAKREFNSRDERRRNNSNGASERSPRRERRDVGDME
LYRIEVGRDDGVEVRHIVGAIANEADISSRYIGNIKLFASHSTIELPKGMPNELLNHLTR
TRILNKPMQMQLLGEAQPFERRGNGQRNGGELRERGRRFGNERRSEREQFRGRNEGHNNA
GLRRRSNHNI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgagactgaaatctcttttgctgatttaggtttatcaacaccaattctttct
gcactaaatgaccttggttatgaaaaaccatcgccaatccagcagcaatgtatcccctat
ttattagacggatgtgacgtattaggtatggcacaaaccggtagtggtaaaacagcagct
tttagtttaccgctattacataatatcgatatcacattaaaagccccgcaaatcttagtg
ctggcaccaacgcgtgagttagccgtacaagttgcggaagccatgggtgaattttccaaa
cacatgcgttcagttaatgtggtggcactctatggtgggcagcgttacgattcgcagtta
cgcgcactaagacaaggtccacaaattgtagtgggaacaccgggtcgcttattagatcac
ttgaaacgagggacattaaatttatcccatttacgtggtttggttcttgatgaagcggat
gaaatgttacgtatggggttcattgaagacgttgaaaatatcatgagccagatcccaagc
gagcatcaaacggcgctgttttctgccaccatgccggaagcgatccgtcgtattacccgt
cgctttatgaaatctccaaaagagatcagcattcaatccagtgtgacgacgcgcccagac
attacccaaagttactggtctgtctatggtatgcgtaaaaatgaagcattggttcgtttt
ttggaagcagaagattttgatgcggcaattatttttgtgcgcactaaaaatgccacatta
gaggttgctgaagcgcttgaacgtagtggctataacagttcagcgctaaatggcgatatg
aatcaagcgctacgtgagcaaacattagagcgtttgaaagatggtcgccttgatatatta
attgccactgatgtggcagcacgtggtctagatgttgaacgtattagtttagttgtcaat
tatgacataccgatggatgctgagtcttatgtgcatcgaattggtcgtactggtcgggca
ggccgagctgggcgcgctattttgtttgtggataatcgtgaacgtcgactattacgcaat
attgaacgtaccatgaagcagccaattaccgaagttgaattacctagtgcggcggtttta
agtgagcgtcgccaggctaagtttgctgaaaatattcaaaagcaattagaaagcggtgat
ttagagaaatatcgtgccttactgactaaattagttgctaatgatgaactggatatggaa
actttagcttctgcgctattaaaaatggcgcaaggtgatcggccgttaatattgccacct
gatcctgtgcgtcgtgcaaagcgtgaatttaattcgcgtgatgagcgtcgtcgcaataat
agtaatggtgcttcggagcgtagtccgcgtcgtgagcgtcgtgatgttggtgatatggaa
ttgtatcgtattgaagttggtcgtgatgatggcgtagaagttcgccacattgtcggtgca
attgctaacgaagcggatattagtagtcgctatattggtaatattaagttgtttgcctcg
cactcaacgatagagttaccaaaaggaatgccaaatgaattacttaatcatttgacacgt
acacgtattttgaacaaaccaatgcaaatgcaattgttaggtgaagcacaaccgtttgaa
cgtcgtggtaatggacaacgcaatggtggtgaattacgtgagcgaggacgtcgctttggt
aatgaacgtcgtagtgagcgtgaacagttccgtggacgtaatgaaggacataataacgct
ggattacgtcgtcgtagtaatcacaatatctaa
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