Arsenophonus nasoniae: ArsFIN_29740
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Entry
ArsFIN_29740 CDS
T05992
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ans
Arsenophonus nasoniae
Brite
KEGG Orthology (KO) [BR:
ans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ans03009
]
ArsFIN_29740 (srmB)
Enzymes [BR:
ans01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ArsFIN_29740 (srmB)
Ribosome biogenesis [BR:
ans03009
]
Prokaryotic type
rRNA helicases
ArsFIN_29740 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
DUF3834
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QBY44390
UniProt:
A0A4P7L078
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All DBs
Position
2727023..2728351
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AA seq
442 aa
AA seq
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MTATTFSELELDQSLLNALDDKGYERPTAIQLATIPAAMEGRDILGSSPTGTGKTAAYLL
PVIQHLLDFPRKRSGPPRILILTPTRELAMQVAEQAKALAKYTHLDIATITGGVSYVNHA
EIFSENQDIVVATTGRLLQYIKEENFDCRAIETLILDEADRMLDMGFANDIETIAGETRW
RKQTMLFSATLAGEAIHDFAERLLNNPHEIDADPSRRERKKIQQYYYRADNLEHKTALLC
HLLKQPDASKSIIFVRKRERAHELVQWLQQANIKTWLLEGEMVQAKRTEAVKRLNSGQIN
VLVATDVASRGLDIDDISHVFNFDLPRTADVYLHRIGRTARAGRKGIAISLVEAHDQPLL
GKINRYLNEPLKIRVIDSLRPTTKAPSESSLRKTKPSKKIRLKRQEKKKIDQQQKKKTKQ
RHRDSKNIGKRRKPSVKQSDNS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaccacattttctgaacttgagttagatcaaagtctgctcaatgcactggat
gataaaggctatgagcgcccgacagccattcagcttgcaactatccctgctgctatggaa
ggacgcgatattctaggttcatcgcctacaggaacaggaaaaaccgccgcttatttacta
ccggtgatccaacatttacttgattttccgcgtaaacgttctggaccaccccgtattcta
attctaacgccaacccgtgaactggcaatgcaagtggcagaacaggcaaaagcgttagcc
aaatacactcatcttgatatcgcaaccattaccggcggagtgtcctatgttaaccacgct
gaaatttttagtgaaaaccaagatattgtcgtcgccaccacagggcgcttattgcagtat
attaaagaagaaaattttgattgccgggcaatcgaaaccttaattctagatgaagccgat
cgaatgcttgatatgggatttgccaacgacattgaaaccattgccggtgaaacacgctgg
cgcaaacagaccatgttattttcagcaacactcgcaggtgaagccattcacgattttgct
gagcggttactgaataatcctcatgaaattgatgctgatccttcaagacgtgaacgaaaa
aagatccaacaatactattatcgcgcggataacctcgaacataaaaccgcactactttgc
catctattaaaacaacccgatgccagcaaatcgattatctttgtccgtaaacgtgaaaga
gcgcatgagttggttcaatggttacaacaggccaatataaaaacctggttacttgaaggg
gaaatggttcaagcaaagcggactgaagcggttaaacgtctaaatagcggacaaattaat
gtcttagtggcaaccgatgtagcctcacgtggcctagatattgacgatattagtcatgtg
ttcaatttcgacttaccgcgtactgctgatgtctatttgcaccgtattggtagaaccgca
cgcgcagggcgaaaaggaatcgcaattagcttagtagaagcccatgatcagccactatta
ggtaaaatcaatcgttatcttaatgaaccattaaaaatacgcgtcatcgatagcctacgg
ccaactacaaaagcaccgtctgaaagttcgctacgtaaaaccaaaccgtcgaaaaaaatt
cggctaaaacgacaagaaaagaaaaaaattgaccagcaacaaaagaaaaaaaccaaacag
cgccatcgcgacagtaaaaatattggcaaacgtcgtaaaccctcagtaaagcaaagtgat
aacagctaa
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