KEGG   Arcobacter nitrofigilis: Arnit_0003
Entry
Arnit_0003        CDS       T01235                                 
Name
(GenBank) DNA gyrase, B subunit
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
ant  Arcobacter nitrofigilis
Brite
KEGG Orthology (KO) [BR:ant00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ant03032]
    Arnit_0003
   03400 DNA repair and recombination proteins [BR:ant03400]
    Arnit_0003
Enzymes [BR:ant01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Arnit_0003
DNA replication proteins [BR:ant03032]
 Prokaryotic type
  DNA Topoisomerases
   Arnit_0003
DNA repair and recombination proteins [BR:ant03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Arnit_0003
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 DUF1184 ASFV_J13L
Other DBs
NCBI-ProteinID: ADG91673
UniProt: D5V3G2
LinkDB
Position
2629..4947
AA seq 772 aa
MSQEYGASNIKVLKGLEAVRKRPGMYIGDTNTNGLHHMVYEVVDNSIDEAMAGYCKNIKI
TMTKDHWIRVEDDGRGIPTAIHEGEGISAATVVLTVLHAGGKFDKDTYKVSGGLHGVGVS
VVNALSKEVKMTIYREGKIHYQEFSKGIPKAPLEVIGDSPRKTGTTIEFLADDSIFEVNT
YDFAVLAKRFREVAYLNSFISITLINEITKKTEVYHFEGGIKQFVEDINTATAVSDAVAF
NDNVDGVEVDIAVMYNDTYVEKTLSFVNNIRTIDGGTHEAGFKAGLTRSIVKYLNENAAA
REKDTKITGDDVREGLIAIISVKVPEPQFEGQTKGKLGSSYVKPICQRLTSEQLDKYFEE
NPAQAKAIMDKALMAARGREAAKKARDMTRKKDAMTVGTLPGKLAECQSKDPAIRELYLV
EGDSAGGSAKQGRDRVYQAILPLKGKILNVEKSRLDKILKSDEIRNMITALGCGIGEDFD
EEKIRYHKIIFMTDADVDGSHIQTLLLTFFFRFLRPVIEKGYLYIAQPPLYRYKKGKNET
YLKDDNALSAFLIENGLESFEFQGLGYNDLVDLFKTVSRYRGMLQQLEKRYSLAEVLKHL
IENSNLVNLDYQALYEEVKGFLEAKGYNILSKRLTDESIQLFVQTKEGLEELLIDDELFA
SPYFSEATYIYNKLVERDLTVFEGRDLVEILDEIETLAKKGAYIQRYKGLGEMNPEQLWE
TTMTPEARRLLRVTIDDATVASDTFTLFMGDEVEPRRNYIEEHAKDVEHLDV
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgagccaagagtatggtgctagtaatattaaagttttaaaaggtcttgaagctgttaga
aaaagaccaggtatgtatattggtgatactaacactaatggattacatcatatggtttac
gaagttgttgataactctattgatgaagcaatggctggatattgtaaaaatataaaaatt
actatgacaaaagatcattggataagagttgaagatgatggtagaggtattccaacagct
attcacgaaggtgaaggtatttcagctgctactgttgttttaacagtacttcatgctggt
ggtaaatttgataaagatacatataaagtttctggtggtcttcatggggttggggtttct
gttgtaaatgccttatctaaagaagtgaaaatgactatttaccgagaaggaaaaattcat
tatcaagagttctcaaaaggtattccaaaagctcctttagaagtaattggagatagtcct
agaaaaactggtactactattgaatttttagctgatgattctatttttgaagtaaatact
tatgattttgctgttttagcaaaaagatttagagaagtagcatatttaaactcatttatt
tctattactttaataaatgaaataactaaaaaaacagaagtttatcattttgaaggtggt
attaaacagtttgttgaagatataaatacagcaacagctgtatcagacgcagttgcattt
aatgacaatgttgatggcgttgaagttgatattgctgttatgtataatgatacttatgtt
gaaaaaactttatcttttgtaaataatattagaacaattgatgggggaactcatgaggct
ggatttaaagctggacttacaagaagtattgttaaatatttaaatgaaaatgcagcagct
agagaaaaagatacaaaaattacaggtgatgatgtaagagaaggtcttattgctattatt
tctgtaaaagttccagaaccacaatttgagggtcaaacaaaaggtaaacttggaagttct
tatgtaaaacctatttgtcaaagattaacatctgaacaattagataaatattttgaagaa
aatccagcacaagcaaaagctattatggacaaagccttaatggcagcaagaggtagagaa
gctgctaaaaaagctagagatatgactagaaaaaaagatgctatgacagtaggaactctt
cctggtaaacttgcagagtgtcaaagtaaagatccagctattagagaattgtacctagtg
gaaggggactctgcgggaggttctgcaaaacaaggtagagatagggtttatcaagcaatt
ttaccacttaaaggtaagattttaaatgttgaaaaatcaagacttgataaaattttaaaa
tctgatgaaattagaaacatgattacagctcttggttgtggtattggtgaagattttgat
gaagaaaaaatcagatatcataaaattattttcatgacggatgcggatgttgatggatcg
catattcaaacactattattaactttcttctttagatttttaagaccagttattgaaaaa
ggttatttatatattgctcaaccacctctttatagatataaaaaaggtaaaaatgagacg
tatttaaaagatgataatgccctatctgctttcttaatagaaaatggtttagaatcattt
gaattccaaggtcttggatacaatgacttagtggatttatttaaaactgtttctagatat
agaggaatgttacaacaattagaaaaaagatactctttagcagaagttttaaaacactta
attgaaaattcaaatttagtaaatttagattatcaagctttatatgaagaagtaaaaggt
ttcctagaagcaaaaggttataatatcttatctaagagattaacggatgaaagtattcaa
ctttttgttcaaacaaaagagggtcttgaagagttactaattgatgatgaactttttgca
tcaccatattttagtgaagctacttatatttataacaaattagtagaaagagatttaact
gtatttgaaggtagagatttagtagaaatattagatgaaattgaaactttagctaaaaaa
ggtgcatatatccaaagatataaaggtcttggagaaatgaatccagagcaactttgggaa
acaacaatgacaccagaagcaagaagacttctaagagtgactattgatgatgcaactgtt
gcatctgatactttcacgctatttatgggtgatgaagtagagccaagaagaaactacatc
gaagagcacgcaaaagacgtagaacacctagacgtttaa

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