Arcobacter nitrofigilis: Arnit_0394
Help
Entry
Arnit_0394 CDS
T01235
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ant
Arcobacter nitrofigilis
Brite
KEGG Orthology (KO) [BR:
ant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ant03016
]
Arnit_0394
Enzymes [BR:
ant01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Arnit_0394
Transfer RNA biogenesis [BR:
ant03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Arnit_0394
Prokaryotic type
Arnit_0394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADG92059
UniProt:
D5V5M3
LinkDB
All DBs
Position
378015..379013
Genome browser
AA seq
332 aa
AA seq
DB search
MKRVFLQNYKPLEFKFYQNIDDFVVTENPINFTNRGNFIILKIEKERLGTWDLIDSLARN
LNIYDNEIGYAGLKDKNATTTQHISIPRKYAKDIKKFKHPKIKILETYLHSTKLNIGDLI
GNSFEINLHEVESCDVGIIEKRLHELAKNGMPNFFGYQRFGKDVKENLEKANKIIYGDLK
IRDRKLEKMLISIYQSDLFNKWLAKRVEMSDGKFKLLDGEVMKSLDDLKFFTPNKINEKI
IKDFEDKKIVPTGLLCGREVYRARNEAQLIEKEFDDTYIQEKGLRRDAIIFPKDIFVNYD
VENKKCKLKFTLPKASYATVVVENIANQNLRV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagtttttttacaaaattataaacccctagaatttaagttctatcaaaatatt
gatgattttgttgttactgaaaatccaataaattttacaaatagaggtaattttataatt
ttaaaaatagaaaaagagagattaggaacttgggatttaattgattcacttgctagaaat
ctaaatatatatgataatgaaataggttatgctggattaaaagataaaaatgcaactact
actcaacacatatcaatacctagaaaatatgcaaaagatataaaaaaattcaaacatcca
aaaataaaaatattagaaacttatttacacagtacaaaactaaatatcggcgatttgatt
gggaattcatttgaaataaatcttcatgaagttgaatcttgtgatgtgggtattatagaa
aaaagattacatgaacttgcaaaaaatggtatgccaaacttctttggttatcaaagattt
ggtaaagatgtaaaagagaaccttgaaaaagcaaataaaattatctatggcgatttaaaa
ataagagatagaaagctagaaaagatgttaatctcgatttatcaaagtgatttatttaat
aagtggcttgccaaaagagttgaaatgtctgatggaaaatttaaattacttgatggtgaa
gttatgaaatcacttgatgacttgaagttctttactccaaataaaataaatgaaaagata
ataaaagactttgaagacaaaaaaatagttcctactggacttttatgtggaagagaagtt
tatcgagcaagaaatgaagcacaacttattgaaaaagagtttgatgatacttatattcaa
gaaaaaggcttaagaagagatgctattatttttccaaaagatatttttgtaaattatgat
gttgaaaataaaaagtgcaaactaaaattcacacttccaaaagcttcatatgctacggtt
gtagttgagaatatagcaaatcaaaatctaagagtttaa
DBGET
integrated database retrieval system
