Arcobacter nitrofigilis: Arnit_0454
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Entry
Arnit_0454 CDS
T01235
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ant
Arcobacter nitrofigilis
Pathway
ant03420
Nucleotide excision repair
ant03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Arnit_0454
03430 Mismatch repair
Arnit_0454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ant03400
]
Arnit_0454
Enzymes [BR:
ant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Arnit_0454
DNA repair and recombination proteins [BR:
ant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Arnit_0454
MMR (mismatch excision repair)
Other MMR factors
Arnit_0454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
ADG92119
UniProt:
D5V5T3
LinkDB
All DBs
Position
442641..444695
Genome browser
AA seq
684 aa
AA seq
DB search
MSEIFLSGLNESQQKAAKHIDGSLLILAGAGSGKTKTITTRLAYLISIGIDPTSILTLTF
TNKAATEMRERAYAMIGSNMSTPPILCTFHKFGLLFLKFYMSELKRKNNFIIIDTDDKKR
ILRTIEKDIPVAMLVSEISKYKNTLLTPTQVKAGAELKIYQQIADVYEKYENYLLKNNLV
DFDDLLLLPYKILSNNEALAKETSGKYQYIMVDEYQDTNELQYKLLRLLCMTHSNLCVVG
DDDQSIYGWRGATIKNILNFTEHFENTLVVKLEENYRSTDTILDHANQLIEHNRDRLGKR
LIGTRAKGDSVRVYESHDENEETRKIILDVKKLLDSGVRGRDIAVLFRVNALSRSLEEGF
NKAGLNYKLVGGMKFYERAEIKDLIAYFRIITNSYDNFSFKRIINKPKRGIGKTTVDKLE
AKSVELKKPIFEIIDEFSPDELNAIVGKKNSRTLKVFLASILDLKDTLEESKMRFLDIFE
DTFDFRASFENLPDGFERQANIDEFYGYVRDYFIQNPLLELDNFLNEIALGTEDTELENE
AISMMSIHASKGLEYKNLFIIGMEEGFFPIVGDGSDTEEERRLGYVAFTRAMDNLTCSFV
HSRFYKGKRTSLLKSRFLAESGLIKGSLMIQQQSSSYKKGDLVQHKIFGMGRVQKAVKAG
KDFKLTINFGGTKRDILSAFVEKA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaatatttttatcaggtttaaatgaatcacaacaaaaagcagctaaacatatc
gatggttctttattaattttagcaggggctggctctggtaaaactaaaactatcacaaca
agattagcatacttaatatcaatagggatagatcctacttcaattttaacactaactttt
acaaataaagcagcaacagagatgagagaaagagcctatgcaatgattggctcaaatatg
agtactcctccaattctttgcacttttcacaaatttggtttactatttttaaagttttat
atgagtgaactaaagagaaagaataactttataataatagatactgatgataaaaaaaga
atactaagaaccatagaaaaagacatacctgttgctatgctagtttcagaaatatcaaaa
tataaaaatacactattaactcctactcaagtaaaagctggagctgaacttaagatttat
caacaaatagcagatgtatatgaaaagtatgaaaactatttattaaaaaacaatttagta
gattttgatgatttgcttttattgccatataaaatattatcaaataatgaagccttggca
aaagagacaagtggtaaatatcaatatatcatggtggatgagtatcaagatacaaatgaa
ttacaatataaacttttaagattactttgtatgacacatagtaatttatgtgttgttggt
gatgatgaccaatctatttatggctggcgtggtgcaactattaaaaatattttaaatttt
acagagcactttgaaaatactttagttgtaaaacttgaagaaaactatagatcaacagat
acaattctagatcatgcaaatcaactaatagagcacaatcgtgatagattgggtaaaaga
ttaattggaacaagagcaaaaggtgatagcgtaagagtttatgaatcacatgatgaaaat
gaagaaacaagaaagattattttagatgtaaaaaaacttttagatagcggagtaagaggt
agggatattgctgtattatttagagttaatgccctttcaagatcactagaagagggtttt
aataaggctggattaaattataaacttgtgggtggtatgaagttctacgaaagagcagaa
ataaaagatttgattgcttattttagaattattacaaactcatatgataacttctctttt
aaaagaattataaacaaaccaaaaagaggtatagggaaaactacagttgataaacttgaa
gcaaaatcagttgaacttaaaaaacccatttttgaaattattgatgaattttcacctgat
gaattaaatgcaattgtagggaaaaagaactcaagaacactaaaagtatttttagcatca
attttagatttaaaagatacgttagaagagtctaagatgagatttttagatatatttgaa
gatacttttgattttagagcttcctttgaaaatcttccagatggatttgaaagacaagca
aatattgatgagttttatggatatgttagggattattttatccaaaatcctcttttagaa
ttggataattttttaaatgaaattgccctaggaacagaagacacagaacttgaaaatgaa
gcaatatcaatgatgagtattcatgcttcaaaaggtttagaatataaaaatctatttatt
ataggtatggaagagggctttttcccaatagttggagatggaagtgatacagaagaagag
agaagattaggctatgtagcatttacaagagctatggataatcttacttgtagttttgtt
cactcaagattttataaagggaaaagaacttctttattaaaaagtagatttttagcagaa
tcaggactaataaaaggttcactaatgattcaacaacaatcatcatcatataaaaaaggt
gatttagtacaacataaaatttttggaatgggaagagtacaaaaagctgttaaagctgga
aaagactttaaacttactattaattttggtggtactaaaagagatattctttcggcattt
gtagaaaaagcataa
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