Arcobacter nitrofigilis: Arnit_0894
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Entry
Arnit_0894 CDS
T01235
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
ant
Arcobacter nitrofigilis
Pathway
ant03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Arnit_0894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ant03400
]
Arnit_0894
DNA repair and recombination proteins [BR:
ant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Arnit_0894
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Arnit_0894
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
Kinesin
AAA_30
Microtub_bd
SWI2_SNF2
CLIC-like_N
DUF87
DUF8076
Motif
Other DBs
NCBI-ProteinID:
ADG92558
UniProt:
D5V2X6
LinkDB
All DBs
Position
890390..892363
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AA seq
657 aa
AA seq
DB search
MAEFKVESKYSPAGDQPQAIEKLSESILAGNQYNTLLGVTGSGKTYTMAKVIEKTQKPTL
IMTHNKTLAAQLYSEFKSFFPNNHVEYFISYYDYYQPEAYIPRSDLFIEKDSSINSELER
MRLSATASLLSFDDVIVVASVSANYGLGNPAEYKSMVQKLSVGFEYSQRTLLMKLVDMGY
KRNDKFFDRADFRVNGDVIDVFPAYWQDEFIRIEFFADEVESISIHEYMTNVKQKDVQDV
TIYSVNPFVVNSENLATAVKKIEEELEDRLAFLKAEDRLVEYQRLKQRVEFDLEMIEGTG
MCKGIENYARHLTGLEPGETPYSMMDYFEQIGKDFLLIVDESHVSLPQFRGMHAADKSRK
EVLVEYGFRLPSALDNRPLMFDEFINKAPHYLFVSATPNELETSMSSVVAEQIIRPTGLL
DPTIEIMDSEFQVEKLHDEIKKVAAKNERVLVTVLTKKMAEELTAYYLDLGIRVKYMHSE
IDTLERVEIIRQLRLGEFDVLVGINLLREGLDIPETSLVAILDADKEGFLRSKTSLIQTM
GRGARNQNGRVILFAKRVTDSMQFAIDVTNKRREVQEAHNKKHGITPTSTTRVLEDNLKL
EEYDAVALKLEKLDKMPAAERKKMLIELNKAMTKASKDLNFEEAIRLRDEIEKIKKL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atagcagagtttaaagttgaaagtaaatatagcccagctggagatcaaccccaagcaata
gaaaaattaagtgaatcaatacttgcaggtaatcaatataatacactgcttggagtaaca
ggttcaggtaaaacttatactatggcaaaagttattgagaaaactcaaaaaccaacttta
ataatgactcataataaaactttggctgcccaactatacagtgaatttaaatcttttttc
cctaacaatcatgtggaatattttatctcttattatgattattatcaaccagaagcttat
attccaagaagtgatttgtttatagaaaaagacagttctataaactcagaacttgaaaga
atgagattaagtgcaacagcttctttactctcttttgatgatgttattgtagtagcttct
gtctctgcaaactatggtttaggaaatcctgctgaatataaatctatggtacaaaaacta
tctgtgggatttgaatactcacaacgtacgcttttaatgaaacttgtggacatgggttat
aaaagaaatgacaagttttttgaccgagctgattttagagtaaacggggatgttattgat
gtctttcctgcttattggcaagatgaatttattcgcatagagttttttgcagatgaagtt
gaatcaatttctattcatgaatacatgactaatgtaaaacaaaaagatgtacaagatgta
actatttattctgtaaatccttttgttgtaaatagtgaaaacctagcaacagctgtaaaa
aaaattgaagaagagttagaagatagattggcctttttaaaggctgaagatagacttgta
gagtatcaaagactaaaacagagagtagagttcgatttagagatgattgaaggtactggt
atgtgtaaaggaatagaaaactatgctcgacacttgacaggacttgaacctggtgaaaca
ccttactctatgatggattattttgaacaaataggaaaagactttttacttatagttgat
gaatctcacgtatcattaccccaatttagaggaatgcacgccgcagataaaagtagaaaa
gaagttcttgttgagtatggatttagattaccaagtgctttagataaccgtcctttgatg
tttgatgaatttatcaataaagccccacattatctgtttgtaagtgcaacaccaaatgaa
ctagaaacttcaatgagttcagttgtagctgagcaaattattagaccaactggattgtta
gacccaactattgagattatggatagtgaatttcaagttgaaaaattacatgatgaaatc
aaaaaagttgctgcaaaaaatgagcgggttttagttacagttttaactaaaaaaatggca
gaagaactaacagcatattatttagacttaggtataagagtaaaatatatgcatagtgag
atagatactttggaacgagtagaaatcattcgtcaattgcgattgggtgaattcgatgtt
ctagttggaatcaatcttttaagggaaggtttagatatcccagaaacttctttggtagct
attttggatgcagataaagaaggatttttaagaagtaaaacttctcttatccaaacaatg
ggaagaggggcaagaaatcaaaatggacgggttattttatttgctaaaagagtaactgat
tctatgcagtttgccatagatgtgacaaataaaagaagagaagttcaagaagcacacaat
aaaaagcatggcatcacaccaactagtaccacaagagtattagaagataacctaaaactt
gaagagtacgatgctgtagccttgaagttagagaagttagacaaaatgccagcagctgag
agaaagaagatgctcatagagctaaataaggcgatgacaaaagcttcaaaagacttgaac
ttcgaagaagcgataaggctccgtgacgaaatagaaaaaatcaaaaaattgtaa
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