Arcobacter nitrofigilis: Arnit_1349
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Entry
Arnit_1349 CDS
T01235
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ant
Arcobacter nitrofigilis
Pathway
ant00061
Fatty acid biosynthesis
ant00071
Fatty acid degradation
ant01100
Metabolic pathways
ant01212
Fatty acid metabolism
ant02024
Quorum sensing
ant04146
Peroxisome
Module
ant_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ant00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Arnit_1349
00071 Fatty acid degradation
Arnit_1349
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Arnit_1349
09145 Cellular community - prokaryotes
02024 Quorum sensing
Arnit_1349
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ant01004
]
Arnit_1349
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ant04147
]
Arnit_1349
Enzymes [BR:
ant01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Arnit_1349
Lipid biosynthesis proteins [BR:
ant01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Arnit_1349
Exosome [BR:
ant04147
]
Exosomal proteins
Exosomal proteins of breast milk
Arnit_1349
Exosomal proteins of breast cancer cells
Arnit_1349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADG93007
UniProt:
D5V572
LinkDB
All DBs
Position
complement(1318158..1319879)
Genome browser
AA seq
573 aa
AA seq
DB search
MNPYRFSTYNEMFDYLTTTYDNPTLLNFINANNKYESISALQFKEKVICLCAALQNLGIK
KGTMVAIFSKSSPFWLIFDFALQQLGAVSVPIFANISTKNLNFELKDSKCKYIFIDDINR
INDIKEEIIFITHNFCIKEKNYYNLDEIIVMGKEICNRLEYVEHKPKEDDIFSIVYTSGN
TGDPKGVILSHKNIISQVKDINELIQLDKKEVILSILPLAHIFERAVMSYYISRGVSIYF
IDDITNVATLMKTVRPTMMTVVPRLLEKIYYKIKTNISDKPFFSKLIASFAFHYALKENI
NKDSILFKLFNKLVYSKFREIFGGRIKWLVSGGAPLEKNIYQFFLNIEVPLYQGYGMTEF
SPVISTNYPGANRVGTSGKAMPTAEVKIENDELLVKGPSLMKGYLNNEELTKKTIDEKGW
LHTGDVASIDEDGYIYIQSRKKDIFKTSTGEYVNAIPIEQELSKNKYIEFAVLISSNRKY
TTALLFVDHERYTQHEKSSNLTIDEYFNQSRIQKSIQNHIDRLNKKVNKWEMIIKYKLIT
KQATIEGGELTPSMKVCREAIENKYKEEIQSMY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatatagattttctacttacaatgaaatgtttgattatctaacaactacttat
gataatcctactttactaaacttcataaatgctaataataaatatgaatcaatatctgca
ttgcaattcaaagaaaaagtaatttgcttatgtgctgctttacaaaacttgggtataaaa
aaaggcacaatggttgctattttttcaaaatcatctcctttttggttaatctttgatttt
gcacttcaacagctaggagcagtatctgtcccaatatttgcaaacatctcaacaaaaaat
ttaaattttgaattaaaagattcaaaatgtaaatatatctttatagatgatataaataga
ataaatgacataaaagaagagattattttcatcacccataatttttgtataaaagaaaaa
aactactacaacttagatgaaataatagttatgggaaaagagatttgtaatagacttgaa
tatgtagagcataaaccaaaagaagatgatattttttctattgtttatacaagtggaaat
acaggtgatccaaagggtgttattctaagtcataaaaatataatttcccaagtaaaagat
ataaatgagttaattcaattggataaaaaagaagttattttatctatacttccccttgct
catatttttgaaagagctgttatgagttattatatttcaaggggtgtttctatttacttt
atagatgatattacaaatgtagcaacgttgatgaaaacagtccgtccaacaatgatgacc
gtagtgccaagacttttagaaaaaatatattacaaaataaaaacaaatatatctgacaaa
cccttttttagtaaactaattgcttcttttgcttttcactatgcactaaaagagaatata
aataaagactcaatcttatttaaactatttaataaacttgtttattcaaaatttagagaa
atatttggtggaagaatcaagtggttagtctcaggaggtgctcctttagaaaaaaatatc
tatcaatttttcttaaatattgaagttccactatatcaaggatatggtatgactgagttt
tccccagttatttctacaaattatcctggggcaaatcgtgtgggaacatcaggtaaagca
atgccaacggcagaagttaagattgaaaatgatgaacttctagtaaaaggtccttctttg
atgaaaggatatttaaataatgaagaactaactaaaaaaactattgatgaaaagggttgg
cttcatacaggagatgttgcttcaattgatgaagatggatatatttatattcaaagtaga
aaaaaagatatatttaaaacctctacaggagagtatgtaaatgcaattccaattgaacaa
gaactttctaaaaataaatatatagagtttgcagttttaatatcaagtaatagaaaatat
actacagccttactctttgttgaccacgagcgatatactcaacatgaaaaatcaagtaac
ttaactatagatgagtattttaaccaaagtagaattcaaaaatctatacaaaaccatata
gatagattaaacaaaaaagtaaataaatgggaaatgattataaaatataaactaataaca
aaacaagccacaatagaaggtggagaattaaccccttctatgaaagtttgtagagaagca
attgaaaataaatataaagaagaaattcaaagtatgtattag
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