Arcobacter nitrofigilis: Arnit_1428
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Entry
Arnit_1428 CDS
T01235
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ant
Arcobacter nitrofigilis
Pathway
ant03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ant00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Arnit_1428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ant03021
]
Arnit_1428
03400 DNA repair and recombination proteins [BR:
ant03400
]
Arnit_1428
Enzymes [BR:
ant01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Arnit_1428
Transcription machinery [BR:
ant03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Arnit_1428
DNA repair and recombination proteins [BR:
ant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Arnit_1428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ADG93086
UniProt:
D5V5F1
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All DBs
Position
1397568..1398566
Genome browser
AA seq
332 aa
AA seq
DB search
MKKFADTPFLPTEVEIEAISETEAKISAYPFESGFAITLAHPLRRLLLSSSVGYSPIAVK
IEGASHEFDSLRGMLEDIAIFIINLKNIKFKILSDENQVEVEYSFNGPKEIKGSDLVNSD
VEIVSPEAHLATINADCNLTFSVIIQKGIGYMPSEDIRDMVSSDYIPLDAFFTPVKKVVY
DIEKMLVEDNPNFEKAVFTVQTNGQITPINAFKEAVSVMYSQMSVFNKVFDLSEVTVSDS
TEEPVELKDLIVKIDDLNLSARSFNSLDRAGLKYLGELVLMSEVEVKNIKNLGKKSYDEI
ADKLASLGFPVENTLPENIASALRRKLEQFKA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttgcagacactccatttttaccaacagaagttgaaatcgaagcaatcagt
gaaactgaagctaagatttctgcatatccatttgaaagtggttttgcaattacattagcg
cacccattaagaagactacttctatctagctcagttggatactctccaattgcagttaaa
atagaaggggcaagccacgagtttgattctttaagaggtatgctagaagatattgctatt
tttattatcaatcttaaaaatattaaatttaaaattctaagtgatgaaaatcaagtagaa
gttgaatattctttcaacggacctaaagaaataaaaggttctgacttagtaaactctgat
gttgaaattgtaagtccagaagctcacttagctacaatcaatgctgattgtaacttaact
ttctctgttattattcaaaaaggtattggttatatgccttctgaagatattagagatatg
gtttctagtgattatattccacttgatgctttctttactccagtaaaaaaagttgtttat
gatattgaaaaaatgctagtagaagacaaccctaactttgaaaaagctgtatttacagtt
caaactaatgggcaaattacaccaatcaatgctttcaaagaagctgtttctgtaatgtat
tctcaaatgtcagtattcaataaagtattcgatttatctgaagttacagttagtgattca
actgaagaacctgtagaattaaaagatttaattgttaaaattgacgatttaaatttaagt
gctagaagttttaactctcttgatagagcagggttaaaatacttaggtgaattagtactt
atgagtgaagtagaagttaaaaatattaaaaacttaggaaaaaaatcttatgacgagatt
gctgataaattagcatctttaggattcccagttgaaaatacacttccagaaaatattgca
tcagctttaagaagaaagctagagcagtttaaagcataa
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