Arcobacter nitrofigilis: Arnit_1772
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Entry
Arnit_1772 CDS
T01235
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ant
Arcobacter nitrofigilis
Pathway
ant03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ant00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Arnit_1772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ant03019
]
Arnit_1772
03016 Transfer RNA biogenesis [BR:
ant03016
]
Arnit_1772
Enzymes [BR:
ant01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Arnit_1772
Messenger RNA biogenesis [BR:
ant03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Arnit_1772
Transfer RNA biogenesis [BR:
ant03016
]
Prokaryotic type
tRNA degradation factors
Arnit_1772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADG93426
UniProt:
D5V1J2
LinkDB
All DBs
Position
complement(1772064..1774241)
Genome browser
AA seq
725 aa
AA seq
DB search
MSTVCEFELNGKDEIFEFNKVAKQANGSVLAKCGNAVILATVVSEFDNPGSEDFTPLTVQ
YIEKAYAAAKIPGGFFKRESKPSELETLTSRIIDRSLRPLFPKGYVYPTTITVMVLSADK
DVDLQTLALNAASAALYTSNIPVKKSVAGVRIAKIDGEYIVNPNVTDMVNSTLDLYVAGS
KDELLMIEMRAISSEDMVEVDIEAFSKIHKTNEMTEEELVEAISIAQIALKEANSTYETG
FENVCKEKHEVELVEFTISEDLIVHVKNTYLHDVKDAVKKLAKSERATELKDLAKKIAKD
EYCTSNEFPFENVYEAVSIVKKEVVRAMIVNDHVRADGRGLKTVRPISIDTNILPSAHSS
CLFTRGETQALVVATLAGAKDGQMFETLNEKSTSMENFMVHYNFPGFSVGEAKPMFGVGR
RELGHGNLGKRALEATIDRDFADTVRLVSEILESNGSSSMATVCGGSLALKAAGVPISGL
VAGVAMGMVVEGDKHCVLTDIMGLEDHDGDMDFKVAGPKTGITALQMDIKLGGIELSVLK
EALLQAKEGREHILTLMEEASAEIIPSPALPLMEQFAIDPSKIMVVIGKAGSTIKEIIEK
FSVSIDLDRDSGNVKVAGDNKQNVLDACAHIKTISDNAPSRKQNEKIIFDSLYKEEEVLE
GIVERIVDFGAFMKLPKGGEGLLHISKISKERVKNVSDVLSVGDKVELKVLKVSRDRIEL
ASANI
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagtatgcgagtttgaattaaatggaaaagatgagatttttgagtttaataaa
gttgcaaaacaagctaatgggtcagttttagcaaaatgtggtaatgcagttatattagca
acagttgtaagtgagtttgataatcctggttctgaagattttactccattgacagtacaa
tatattgaaaaagcatatgcagcagcaaaaattccaggtggttttttcaaaagagagagt
aaaccaagtgaattagaaactttaacttcaagaattatagatagaagtttaagaccactt
ttcccaaaaggttatgtttatcctacaacaattacagttatggttttaagtgcagataaa
gatgttgatttacaaacattagcattaaatgctgcaagtgcagctttatatacttctaat
attcctgttaaaaaatcagttgcaggtgtaagaattgctaaaatagatggagaatatatt
gtaaatccaaatgttacagatatggtaaattcaactttagatttatatgtagcaggttca
aaagatgaacttcttatgattgagatgagagctatttcatctgaagatatggttgaagtg
gatattgaagctttttcaaaaatccataaaacaaatgagatgacagaggaagaattagtt
gaagctatttcaattgctcaaatagctttaaaagaagctaactcaacatatgaaactggt
tttgaaaatgtttgtaaagaaaaacatgaggttgaattagtcgaatttacaatttctgaa
gatttgatagtacatgtaaaaaatacatacttacatgatgtaaaagatgctgttaaaaaa
ttagctaaaagtgaaagagcaactgaattaaaagatttagctaaaaaaattgcaaaagat
gaatattgtacttcaaatgagtttccttttgaaaatgtttatgaagcagtttcaattgta
aaaaaagaagttgtaagagcaatgattgtaaatgatcatgtaagagctgatggaagaggt
ttaaaaactgttagacctatatctattgatacaaatattttaccatctgctcactcttct
tgtttatttacaaggggagaaacacaagctttagttgtggcaacattagcaggtgctaaa
gatggtcaaatgtttgaaacattaaatgaaaaatcaacatctatggaaaacttcatggtt
cattataacttccctgggttttcagtaggtgaagcaaaacctatgtttggtgtaggaaga
agagaactaggacatggtaacttaggtaaaagagcattagaagctactattgatagagat
tttgcagatacagtaagattagtatctgaaattttagagtcaaatggttcttcatcaatg
gcaacagtatgtggtggttctttagccttaaaagcagcaggagtaccaatatcaggttta
gttgcaggtgttgctatgggaatggttgttgaaggtgataaacattgtgtattaacagat
attatgggattagaagaccatgatggagatatggattttaaagttgctggtccaaaaaca
ggaattactgctttacaaatggatattaaacttggtggaatagaattaagtgttttaaaa
gaggctcttttacaagcaaaagaaggaagagaacatatcttaactcttatggaagaagca
tctgctgaaattattccaagtccagcattgccattgatggaacaatttgcaattgatcct
agtaaaatcatggtagttattggaaaagcaggctctacaattaaagaaattattgaaaaa
ttttctgtctctattgatttagatagagatagtggtaatgttaaagttgctggtgacaat
aaacaaaatgtattagatgcttgtgcacatattaaaacaatttcagataatgccccttca
agaaaacaaaacgaaaaaattatttttgattctttgtataaagaagaggaagttttagaa
ggtatagttgagcgaatagttgattttggtgcatttatgaaactaccaaaaggtggtgaa
ggattgttacatatctctaaaatatctaaagagagagttaaaaatgtctctgatgtttta
agtgttggtgataaagtagaattaaaagtattaaaagttagtagagatagaattgagtta
gcttcagctaatatttga
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