Arcobacter nitrofigilis: Arnit_1957
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Entry
Arnit_1957 CDS
T01235
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ant
Arcobacter nitrofigilis
Brite
KEGG Orthology (KO) [BR:
ant00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ant01011
]
Arnit_1957
Enzymes [BR:
ant01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Arnit_1957
Peptidoglycan biosynthesis and degradation proteins [BR:
ant01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Arnit_1957
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
LysM3_NFP
Phage_lysozyme2
Motif
Other DBs
NCBI-ProteinID:
ADG93611
UniProt:
D5UZZ9
LinkDB
All DBs
Position
complement(1952249..1953625)
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AA seq
458 aa
AA seq
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MFKIFLIIITLFLSANASLIGSNFSQRDLQILKELDIDPAYITDYKLQKTYNRYLQNIQD
KYVKRFNRASLFVPKVKDILREEGLPETFLYLAMAESSFTLDAKSRSRATGMWQFMPATG
RNLGLKNDIYVDERMDIVKSTYAAAKYLKYLHGEFGKWYLAAVAYNCGQGRVIEAITRAT
LDLYEDENGKKNDKSNEIKKYRHTITLYQQKRVRFSQLNKIYKEVLTWDVKPDIYELLME
QKDVRRQYLPEESRNYIRKIISLAMMNNQSFVTENDHSHIRNIGVTSPIATVRVKGGLHL
KNIAKAIGMDYRDLKMLNKQLIRNIIPTYKKDYQIYIPYSRLSIFNQNKMNIEPTKYQIH
IVKRGDNLYDIGRKYGISYKVIKSFNKLKSNRLALNQKLTIPFVEGTKLKTKNYYVKNGD
TLLSIAKMFRVEISKLMADNNLKNSSIKRGDKLVITYR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaaaatttttctaataatcataactctctttttgagtgcaaatgcatcgttaata
ggaagtaacttctctcaaagagatttacaaatcttaaaagagctagatatcgacccagct
tatattacagattataaactacaaaaaacttataatagatatttacaaaatattcaagat
aaatatgtaaaaagatttaatagagcttcactttttgttccaaaagtaaaagatatacta
agagaagagggcttacctgagacttttttatatcttgcaatggcagaatcaagttttact
ttggatgcaaaatcaagatcaagagctacaggtatgtggcaatttatgccagcaactggt
agaaatcttggattgaaaaatgatatttatgttgatgaaagaatggatatcgttaaatcg
acatacgcagcagctaaatatttaaaatatttgcatggagagtttggtaaatggtatctt
gcagcagttgcatataattgtggacaaggaagagtaattgaagctattacaagagcaact
cttgatttgtatgaagatgaaaatggtaaaaaaaatgataaatcaaatgagataaagaaa
tatagacatactattactttataccaacaaaaaagagttagatttagccaattaaataaa
atctataaagaagtcttaacatgggatgtaaaaccagatatttatgaacttttaatggaa
caaaaagatgttagaagacaatatttacctgaagagagtagaaactatatacgaaaaata
atctcacttgcaatgatgaataatcaaagttttgtaactgaaaatgatcattctcatatt
agaaatatcggagtgacttcaccaattgctactgttagagtaaaaggtggcttgcattta
aaaaatattgcaaaagcaattgggatggattatagagatttaaaaatgttaaacaaacaa
cttattagaaatatcattcctacttataaaaaagattatcaaatatatattccatatagt
agattatctatttttaatcaaaataaaatgaacattgaaccaacgaaatatcaaattcat
attgtaaaaaggggtgacaacctttatgatattggtagaaaatatggaatctcttataaa
gttattaaaagttttaataaacttaaaagtaatagattagcattaaaccaaaaattgact
attccatttgtagaaggaactaagttaaaaacaaaaaactattatgttaaaaatggagat
actttattatcaatagcaaaaatgtttagagtagaaattagtaaattaatggcagataat
aatttaaaaaatagttctataaaaaggggagataaacttgttattacctatagataa
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