Arcobacter nitrofigilis: Arnit_2745
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Entry
Arnit_2745 CDS
T01235
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ant
Arcobacter nitrofigilis
Pathway
ant03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ant00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Arnit_2745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ant03021
]
Arnit_2745
03019 Messenger RNA biogenesis [BR:
ant03019
]
Arnit_2745
Transcription machinery [BR:
ant03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Arnit_2745
Messenger RNA biogenesis [BR:
ant03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Arnit_2745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_25
OB_RNB
AAA
Spore_III_AA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADG94393
UniProt:
D5V6X3
LinkDB
All DBs
Position
complement(2766963..2768306)
Genome browser
AA seq
447 aa
AA seq
DB search
MEETTTQTKKNTPAKGNSTGRKTRTHIPVEGHTIEKLREYPLEELLQIAKKLDVENPQEL
KRQELMFSILKTQIDQGGFILFTGILEIKDGGFGFLRAMDGNFSDTSNDSYVSATQIKKF
ALRTGDIVTGQVRPPNKESEKYYALLKIEAINYLPIHESKNRPLFDNLTPLYSTEKFKFE
YESHKMTGRILDLFSPMGKGQRGLIVAPPKTGKTELLKELAHGISRNHPEAHLMVLLIDE
RPEEVTDMQRSVKGDVYSSTFDLPAQNHVRVAEIVIEKAKRMVEMKKDVVILLDSITRLA
RAYNTVTPSSGKVLSGGVDANALHKPKRFFGAARNIEEGGSLTIISTALIDTGSKMDEVI
FEEFKGTGNSEVVLSRDASNKRVYPAVDIIKSGTRKEELLLTPDILQKTWILRNAIASMD
EVEALKFLYSKMLKTANNEDFFAGMNE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaagagacaacaactcaaactaaaaagaatactcctgcaaaaggaaattctactggc
agaaaaactaggacgcatatccctgtagaagggcatacaattgaaaaactaagagaatat
cctttagaagaactacttcaaatagctaaaaaactcgatgttgaaaaccctcaagagctt
aaaagacaagaacttatgttctcaattttgaaaactcaaatcgaccaaggtggatttata
cttttcacaggtattttagagataaaagatggtggatttggttttttaagagcaatggat
ggaaatttttctgatacatctaatgattcttatgtaagtgcaacacaaattaagaagttt
gcactaagaactggggatattgtaactggacaagttaggcctccaaataaagagagtgaa
aaatattatgctctacttaaaatcgaagcaatcaattacctaccaatccacgaatcaaaa
aacagaccactatttgataacttaacacctttatactcaactgaaaagtttaaattcgaa
tatgaatcacataaaatgacagggagaatcttagatttattctctcctatgggtaaaggt
caaaggggacttatcgttgctcctccaaaaactggtaaaacagaacttttaaaagaacta
gcacatggtatttcaagaaatcacccagaagctcacttgatggttttattaatagatgaa
agaccagaagaagttacagatatgcaaagaagtgtaaaaggtgatgtttactcttctact
tttgacttacctgcacaaaatcatgtaagagttgcggaaatcgttattgaaaaagcaaaa
agaatggttgagatgaaaaaagatgtagttatcttacttgattcaatcacaagattagca
agagcatacaatacagtaactccaagtagcggaaaagtactttcaggtggggttgatgca
aatgcactacacaaaccaaaaagattcttcggagctgctagaaatatagaagagggtgga
agtttaactatcatctcaactgcacttatagatacaggttcaaaaatggacgaagttatt
ttcgaagagttcaaaggaactggaaatagtgaagttgtacttagccgagatgcttcaaac
aaaagagtttacccagctgttgatattatcaaatcaggtacaagaaaagaagaacttctt
cttactccagatatcttacaaaaaacatggatactaagaaatgcaattgctagcatggat
gaagtagaagcgttgaaatttctttatagtaagatgttaaagacggcgaataatgaagac
tttttcgcaggaatgaacgaatag
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