Arcobacter nitrofigilis: Arnit_2989
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Entry
Arnit_2989 CDS
T01235
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ant
Arcobacter nitrofigilis
Pathway
ant03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ant00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Arnit_2989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ant03400
]
Arnit_2989
Enzymes [BR:
ant01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Arnit_2989
DNA repair and recombination proteins [BR:
ant03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Arnit_2989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADG94637
UniProt:
D5V7L7
LinkDB
All DBs
Position
complement(3013542..3014387)
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AA seq
281 aa
AA seq
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MKYVGAHVSASGGVYNAPINATAIGAKAFALFTKNQRQWAAKPLENDVLDKWFEEMDKCG
ILPKHILPHDSYLINLGHPVEESRQKSLDGFIHEIERCEILKLDRLNFHPGSHLRKISEE
ECLDNIALSMNKAIDSTNDVKLVIENTAGQGSNLGYKFEHLAYIIDKIEDKSRVGVCIDT
CHMFTAGYDIRTREAYDKTWKEFDEIVGRQYLMGMHINDSKPDLGSRVDRHDSLGVGKIG
WDAFKFIMNDERMDDIPLVLETINEEIWEQEIQDLYNLVEK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgttggagcacatgtaagcgcaagtggcggagtgtacaatgcacccataaat
gcaacagcaataggagcaaaagcctttgctctttttacaaaaaatcaaagacaatgggca
gcaaaacctttagaaaatgatgttcttgataaatggttcgaagagatggacaaatgtgga
atattgccaaagcatattttaccacatgatagttatttgataaatttaggacatcccgtt
gaagagagtcgtcaaaaatcacttgatggatttatccatgagattgagagatgtgaaata
ctaaaactagacagactaaacttccacccaggaagtcatttgcgaaagataagtgaagaa
gagtgtttagataatatagccctttctatgaataaagcaattgattcaacaaatgacgta
aaactagtaatagaaaatacagcaggacaaggaagtaacctaggatacaagtttgaacac
ttagcttacatcatagataagatagaagataaaagtagagtaggagtatgtatagatact
tgtcacatgtttacagctggatatgatataagaacaagagaagcctatgataaaacttgg
aaagagttcgatgagatagtaggaagacaatacctaatgggcatgcacataaatgactca
aaaccagacttaggaagtagagttgatagacacgattctttaggtgtaggaaagattggt
tgggatgcttttaagtttattatgaatgatgagagaatggatgatattcctcttgtccta
gaaacgatcaatgaagaaatctgggaacaagaaatacaagatttgtataatcttgtagaa
aaataa
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