Arvicanthis niloticus (African grass rat): 117693189
Help
Entry
117693189 CDS
T08817
Symbol
Smg9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117693189 (Smg9)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117693189 (Smg9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
BrxC-PglY_N
AAA_30
Motif
Other DBs
NCBI-GeneID:
117693189
NCBI-ProteinID:
XP_034339510
LinkDB
All DBs
Position
1:3774261..3796447
Genome browser
AA seq
520 aa
AA seq
DB search
MSESGHSQPGLYGIERRRRWKEPGSSGPQNLSGPGGRERDYIAPWERERRDGSEDPSTNV
MQKTPIILSKPPAERSKQPPPSTAPAAPPTPAPLEKPIVLMKPREEGKGPVAGTGASTPE
GTAPPPPTVPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPTAMDPVVGQAKLLPPERMKHS
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRAYVFRA
QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV
EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSAGSDEG
TEYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD
FLDAEVNLFLVPFMDSEAENENPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSM
ARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLLA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtctgggcacagtcagcctgggctctatgggatagagcggcggcgacggtgg
aaggagccaggctccagtggcccccagaatctctctggtcctggtggtcgggagagagac
tacattgcaccctgggaaagagagagacgggatggcagtgaagaccccagcactaacgtc
atgcagaaaactcccatcatcctctcaaagcctccagctgagcggtcaaagcagccgcca
cctagtacagcgccagctgctccgccaaccccagccccactggagaaacccattgtgctc
atgaagccacgtgaggaggggaaggggcctgtggctggaacaggggcttccacccctgaa
ggcactgccccaccgccccccacggttcctgcaccccccaaaggagagaaggaggggcag
agacccacacagccggtgtaccagattcagaaccggggcatgggcactgctgccccgact
gccatggaccctgtggtgggccaggctaagctcctgcccccggagcgcatgaagcacagc
atcaagctggtagacgaccagatgaactggtgtgacagcgccatcgagtacctgctggat
cagacggacgtgttagtggtcggtgtcttaggcctccaggggacaggcaagtccatggtc
atgtcactgctgtcagcaaacactccagaggaagaccagagggcgtatgtattccgggcg
cagagtgcggagatgaaggaacgagggggcaaccagacaagcggcattgacttcttcatt
acccaagagcggattgtcttcctagacacgcagcccatcctcagcccatccatcttggat
cacctcatcaataacgaccgaaaactgcctccggagtacaacctccctcatacctatgtg
gagatgcagtccctgcagatagctgccttcctcttcacggtctgccacgtggtgattgtc
gtgcaggattggttcaccgacctcagtctgtacaggttcctgcaaacggcagagatggtg
aagccatccaccccatcccccagccatgagtccagcagctcagcaggctcggatgagggc
actgagtactacccacacctcgtcttcctgcagaacaaggcacgtagagaggacttctgt
ccccggaagttacgtcagatgcacctgatgattgaccagctcatggcgcactcccacctg
cgctacaaggggacactgtccatgctgcagtgcaacgtcttcccagggctgccgcccgac
ttcctggatgccgaggttaacttgttcctggtacccttcatggacagtgaagctgagaac
gagaacccacctcgagcagggcctggctccagccccctcttctccctgctgcctgggtac
cgaggtcaccccagcttccagtccttggtcagcaagctccgcagccaggtgatgtctatg
gctcggccacagctgtcacacacaatcctcactgagaagaattggttccactacgctgcc
cgaatctgggatggggtgaagaagtcctcagccctggcagagtacagccgcctgctggcc
tga
DBGET
integrated database retrieval system
