Arvicanthis niloticus (African grass rat): 117693263
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Entry
117693263 CDS
T08817
Symbol
Copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117693263 (Copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117693263 (Copb2)
Membrane trafficking [BR:
anu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
117693263 (Copb2)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117693263 (Copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Helicase_dom4_arc
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
117693263
NCBI-ProteinID:
XP_034339622
LinkDB
All DBs
Position
21:18982394..19002608
Genome browser
AA seq
905 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
RDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAK
GFQPSRPAAQQGPDGKPASSPVIMASQTTHKEEKSLLELEVDLDNLELEDIDTTDINLDE
DILDD
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcgacttgatatcaagagaaagctaactgctaggtctgatcgagtgaagagt
gtggatttgcatccgacagagccatggatgttggctagtctttacaatggcagtgtgtgt
gtttggaatcatgaaactcagacactggtgaagacgtttgaagtatgtgatcttcctgtt
cgagctgcaaagtttgttgcaaggaagaactgggtggtgacaggagcagatgatatgcag
atcagagtgttcaattacaacaccctggagagggtgcatatgtttgaagcacactcggat
tacattcgttgtattgccgttcatcccacccagccgttcattctcacaagcagtgatgac
atgcttattaagctctgggactgggataagaaatggtcttgttcacaagtgtttgaagga
cacacccattacgttatgcagattgtgataaaccccaaagataacaatcagtttgccagt
gcgtctcttgacaggaccatcaaggtgtggcaactgggctcttcatcaccaaacttcact
ctggagggacatgaaaaaggcgtgaattgcattgattactacagtggtggtgacaagcca
tacctcatttcaggtgcagatgacaggctcgttaaaatatgggattatcagaataaaact
tgtgtgcagaccctggaggggcatgcccagaatgtgtcatgtgcaagcttccatcctgag
ctgcccatcatcatcacagggtcagaagatggaacggtgcgcatctggcattctagcacc
taccggcttgagagcacactgaattacggaatggagagggtgtggtgtgtggccagtctg
agagggtccaacaatgtcgctctgggctatgatgaaggcagcatcattgttaagcttggt
cgggaagaacctgccatgtccatggatgccaatggaaagataatctgggccaagcattca
gaagttcagcaggccaacctgaaagcaatgggcgacactgaaattaaagatggagaaaga
ttgccactggcagtaaaggatatgggcagttgtgaaatatatccacagaccattcagcac
aatcctaatggacggtttgttgtggtgtgtggtgatggagagtatatcatctacacagct
atggcgctgaggaacaagagctttgggtctgcccaggagtttgcatgggcccacgattct
tcagagtatgcaataagagaaagcaacagtgttgtaaagatatttaagaactttaaggaa
aaaaaatcatttaaacccgattttggagctgaaagtatctatgggggcttcttgctggga
gtcaggtctgtaaatggcttagccttctatgactgggagaatactgaactcatccgcaga
attgaaattcagcccaagcacatcttctggtctgactctggagagctggtctgtatcgcc
actgaggagtcattttttatccttaaatatctgtcagaaaaagtgttggctgcacaggaa
acacacgagggagttactgaagatggcattgaagacgcctttgaggttcttggtgaaatt
caggaaattgtgaaaactgggttgtgggtaggtgactgcttcatttacacaagttctgtg
aacagattaaactattacgtgggaggagagatagtcaccattgctcacttggacaggaca
atgtaccttctgggctatattccaaaagacaatcggctttatctgggggataaggaattg
aacattgttagctactccctgttggtttcagtcctggaataccagactgctgtcatgcgg
agggatttcagcatggcggataaggtcctccctaccatccccaaagaacagaggaccaga
gttgcacactttttggaaaaacagggcttcaagcagcaagcacttacagtatccacagat
cctgaacatcgttttgagcttgctcttcaacttggagagttgaaaattgcttaccagtta
gcagtggaagcagagtcggaacagaagtggaaacaacttgctgaactggccattagtaaa
tgtcagttcagcctagcccaggagtgtctgcaccacgcccaggattacggtggtctgctg
ctcttggccactgcctctggaaatgctagtatggtgaacaagctggcagaaggtgcggag
agagacggcaaaaataacgtggcattcatgagctattttttacagggcaagcttgatgct
tgcctggagctcttgatcagaacaggaagactcccagaagctgccttcctagcccgaact
tacttacccagtcaggtctcaagggtagtgaagctgtggagggagaatctttcaaaagtc
aaccagaaagcagcagaatcccttgctgaccccacagagtatgaaaacctattccctgga
ttaaaagaagcctttgttgttgaagaatgggtgaaggagacacatgcggatttgtggcca
gccaagcagtaccctcttgtcacgccaaatgaagagagaaatgttatggaagaggcgaaa
ggctttcagccctcaagacccgcagctcagcagggacctgatgggaaacctgcttctagc
ccagttatcatggcctcccaaacgacccacaaagaagaaaagagtttactagaactagaa
gtggatttggataacttggaattagaggatattgatacaacagacattaatctggatgaa
gacattctggatgactaa
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integrated database retrieval system
