Arvicanthis niloticus (African grass rat): 117693354
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Entry
117693354 CDS
T08817
Symbol
Clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117693354 (Clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117693354 (Clasp2)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117693354 (Clasp2)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
117693354 (Clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
HEAT_DAAF5
Cnd1
RTP1_C1
Sec7-like_HUS
MMS19_C
TAN
TFCD_C
ParcG
Motif
Other DBs
NCBI-GeneID:
117693354
NCBI-ProteinID:
XP_034339805
LinkDB
All DBs
Position
21:34401171..34574317
Genome browser
AA seq
1553 aa
AA seq
DB search
MEPRGAEYFSAQVLQKDVSGRLQAGEELLLYLGAPGAIPDLEDDPSRLAKIVDALTGWVG
SSNYRVSLLGLEILSAFVDRLSTRFKSYVTMVTTALIDRMGDAKDKVREEAQNLTLKLMD
EVAPPMYIWEHLASGFKHKNFRSREGMCLCLIETLNIFGTQPLVISKLVPHLCVLFGDSN
SQVRNAAISAVVEIYRHVGEKLRIDLCKRDIPPARLEMILARFDEVQSSGGMILSVCKDK
SFDDEESVDGNRPSSAASAFKVPAPKTPGNPVNSARKPASAGGPKVGGTSKEGGAGAVDE
DDFIKAFTDVPSIQIYSSRELEETLNKIREILSDDKHDWDQRANALKKIRSLLVAGAAQY
DCFFQHLRLLDGALKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEAIVPTLFNLVP
NSAKVMATSGCAAIRFIIRHTHVPRLIPLITSNCTSKSVPVRRRSFEFLDLLLQEWQTHS
LERHAAVLVETIKKGIHDADAEARVEARKTYMGLRNHFPGEAETLYNSLEPSYQKSLQTY
LKSSGSVASLPQSDRSSSSSQESLNRPFSSKWSTANPSTVAGRVLVGGSKASPLPGSLQR
SRSDIDVNAAAGAKAHHAVGQAVRSGRLGAGALNPGSYASLEDTSDKMDGTASDDGRVRA
KLSTPLVAVGNAKTDSRGRSRTKMVSQSQRSSSPDRNEGSQSANTIGAGSRSGSPGRVLT
TTALSTVSSGAQRVLVNSASAQKRSKIPRSQGCSREASPSRLSVARSSRIPRPSVSQGCS
REASRESSRDTSPVRSFQPLASRHHSRSTGALYVPEVCGASGPGYGMSQSSRLSSSVSAM
RVLNTGSDVEEAVADALLLGDIRTKKKPARRRYESYGMHSDDDANSDASSACSERSYSSR
NGSIPTYMRQTEDVAEVLNRCASSNWSERKEGLLGLQNLLKNQRTLSRVELKRLCEIFTR
MFADPHGKRVFSMFLETLVDFIQVHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKAL
DVTRESFPNDLQFNILMRFTVDQTQTPSLKVKVAILKYIETLAKQMDPGDFINSSETRLA
VSRVITWTTEPKSSDVRKAAQSVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLRN
AGNGTQSSMGSPLTRPTPRSPANWSSPLTSPTNTSQNTLSPSAFDYDTENMNSEDIYSSL
RGVTEAIQNFSFRSQEDMSEPLKRDPKKEDGDTICGGPGMSDPRAGGDATDSSQTALDNK
ASLLHSMPLHSSPRSRDYNPYNYSDSISPFNKSALKEAMFDDDADQFPDDLSLDHSDLVA
ELLKELSNHNERIEERKIALYELMKLTQEESFSVWDEHFKTILLLLLETLGDKEPTIRAL
ALKVLKEILRHQPARFKNYAELTVMKTLEAHKDPHKEVVRSAEEAASVLATSISPEQCIK
VLCPIIQTADYPINLAAIKMQTKVIERVSKETLNVLLPEIMPGLIQGYDNSESSVRKACV
FCLVAVHAVIGDELKPHLSQLTGSKMKLLNLYIKRAQTGSAGADPTTDVSGQS
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atggagccccgcggcgccgagtacttcagcgcccaagtgctgcagaaggacgtgagcggt
cggctgcaggcgggcgaggagctgctgctctacctcggcgcgcccggcgccatcccggat
ctggaggacgacccgagccgcctggccaagatcgtggacgcgctcaccggctgggtgggc
tcgagtaactaccgggtatcattattaggattggagattttaagtgcctttgtggatcga
ttatcaacacgatttaaatcttacgtaacaatggttaccacagctttaatagacagaatg
ggagatgccaaagacaaagtccgagaagaagctcagaatctgacactgaagctgatggac
gaggtggcgccgcctatgtacatctgggagcatctggcctctggcttcaagcacaagaac
tttcggtctcgagaaggcatgtgcctgtgtcttattgaaaccttgaacatctttgggact
caaccactggtcatcagcaagttggtgcctcatttatgtgtcttatttggagattctaac
agtcaggtgagaaatgctgcaatatcagctgtagtggagatttatagacacgtaggagag
aagctgaggattgatttgtgtaaaagagacattccccctgctagattagaaatgatactt
gccagatttgatgaagttcaaagttccggtggtatgattctgagtgtctgcaaagataaa
agctttgatgatgaggaatcagtggatggaaataggccatcatcagctgcttcagccttc
aaggttcctgcacctaaaacacctggaaatcctgtcaacagtgcaagaaagcctgcttca
gcaggtggccctaaggttggaggtacttctaaagaaggaggggctggagcagttgatgaa
gatgattttataaaagcctttacagatgttccttctattcagatctattctagtcgagaa
cttgaagaaacgttaaataagatcagggaaattctgtcagatgacaaacatgactgggac
cagcgtgccaatgcacttaagaaaatccggtcactacttgttgctggagctgcacagtat
gattgctttttccagcatttacggttgttggatggagcacttaagctgtcagctaaggac
ctcagatcccaggtggtcagagaagcttgcatcactgttgcccacctttcgacagttttg
ggaaacaagtttgatcacggcgccgaagccatcgtccctacgctttttaatcttgtcccc
aatagtgccaaagtcatggcgacttctggatgtgcagcgatcagatttattattcggcat
acccatgtaccccgacttatacctttaataacaagcaactgcacatccaagtcagttcct
gtgaggagacgttcatttgaatttttagatttgctgctgcaagagtggcagactcattca
ctggaaagacatgcagctgttttggttgaaactattaagaagggaattcatgatgctgat
gctgaggccagagtggaggcaagaaagacatacatgggtcttagaaaccactttcctggt
gaagctgaaacattgtacaactcccttgagccatcatatcagaaaagtcttcaaacttac
ttaaagagttctggaagtgtagcttctcttccacagtcagacaggtcctcatctagctca
caagaaagtcttaatcgtcctttttcttctaaatggtcaacagcaaatccttcaactgta
gctggaagagtattggtgggaggcagcaaagccagcccccttccaggaagcctccagcgt
tctcggagtgacattgatgtgaatgcggcagctggtgccaaggcacatcatgcagtagga
caggctgtgcgaagtggacgtttaggtgcaggtgccctgaatccaggctcctatgcatca
ctagaggatacttctgacaagatggatggaacagcatctgatgatggtcgggtgagagcc
aagctttctactccgcttgttgctgtgggaaatgccaagactgactctagagggagaagt
cggacaaaaatggtgtctcagtcccagcgttcatcatcacctgacagaaatgaaggatca
caatctgctaataccattggtgctggcagccgatctgggtctccaggaagagttctaacc
acaacagccctctctactgtgagctctggtgcgcaacgagtcctggtcaattcagcttca
gcacagaagagaagcaagataccaaggagccagggctgcagcagagaggccagcccatct
aggctttcagtggcccgcagcagccgtattcctcggccaagtgtgagtcaaggctgtagc
cgggaagctagccgagagagcagcagggacacgagtccggttcgctctttccagccactt
gcctccagacaccattccagatccactggtgccctctacgtccccgaagtgtgtggggcc
tcaggtcctggatatgggatgagccagtcaagccggttgtcatcttctgtcagtgccatg
cgggtcctaaacacaggctccgatgtagaggaggcggtagccgatgccttgctcttagga
gacatacggactaagaaaaaacctgctcgaagaaggtatgaatcatatggaatgcactca
gatgatgatgccaacagcgatgcttctagtgcgtgttcagaacgctcctatagctctcga
aatggtagtattcctacctacatgagacagacagaagacgtggcagaagtcctcaacaga
tgtgctagttccaattggtcagagaggaaagaaggccttttgggtctgcagaacttgtta
aaaaaccagagaacgctaagtcgagttgaactgaaaagattatgtgaaattttcacaaga
atgtttgcagatcctcatggcaagagagtgttcagcatgtttttggagactctagtagat
ttcatacaagtccacaaagatgatcttcaagattggttgtttgtactgctgacacagctg
ctgaaaaaaatgggtgctgatttgcttggttctgttcaggcaaaagttcagaaagccctt
gatgttacaagggaatcttttccaaatgatcttcagtttaatatcctaatgagatttaca
gttgaccagacccaaacgccaagcttgaaggtgaaggtggctatccttaagtacatagaa
actctggcaaagcagatggacccaggagattttataaattccagtgaaactcgcctggca
gtatctcgggtcatcacttggacgacagagcccaaaagctctgatgttcgaaaggcagca
cagtcagtgctgatttctttatttgaactcaataccccagagtttacaatgttactagga
gctttaccaaaaactttccaggatggtgctactaaacttcttcacaatcaccttcgaaac
gctggcaatggcacccagagttccatggggagtcctttgacaagaccaacacctcggtca
ccagccaactggtccagtcctcttacttctcctaccaacacgtcacagaatacgttatct
ccaagtgcatttgattatgacacagagaacatgaattctgaagacatttacagctccctt
agaggtgtcactgaggcaatccagaatttcagcttcagaagccaagaagatatgagtgag
ccactgaagagggaccctaaaaaagaggatggtgacacaatatgtggtggtcccgggatg
tcagatccaagagcaggaggtgatgccactgactccagccagacagctcttgataataaa
gcatctttgctccactcaatgccactccactcctctccacgctcccgagactataatcca
tataactactcagatagcatcagtcccttcaacaagtctgccctcaaggaagccatgttt
gatgatgacgccgaccagtttcctgatgatctttcattagaccactctgacctagttgca
gagttgttgaaggagctgtctaaccataatgaacgtatagaagaaagaaaaattgccctg
tatgaactcatgaagctaacccaggaagaatctttcagtgtttgggatgaacacttcaaa
acaatattattgttattgcttgagacccttggggataaagagcctacaatccgggccttg
gcattaaaagttttaaaagaaatcttaaggcatcaaccagcaagattcaaaaactatgca
gagctcactgtcatgaaaaccttggaagcacacaaagatcctcacaaagaggtggtgagg
tctgctgaggaagctgcctctgtgttggctacttccattagtccagagcagtgcattaaa
gtgctttgtcccatcatacaaactgctgactacccaattaacctagctgcaatcaaaatg
caaacaaaagtgatagagagagtatccaaggagactcttaacgtgctcttaccagagatc
atgccaggtctaatacagggttatgataattcagaaagcagtgtccggaaagcttgtgtc
ttctgcctggtggctgtccatgcggtgattggtgatgagctaaagccacacctcagtcaa
ctcactgggagtaaaatgaagctgctgaacctttacatcaaacgtgcacagacaggctct
gcaggagctgaccccactactgatgtttctggacagagttag
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