Arvicanthis niloticus (African grass rat): 117693391
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Entry
117693391 CDS
T08817
Symbol
U2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117693391 (U2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117693391 (U2surp)
Spliceosome [BR:
anu03041
]
Complex A
U2 snRNP components
U2 related factors
117693391 (U2surp)
Complex B
117693391 (U2surp)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
117693391
NCBI-ProteinID:
XP_034339898
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All DBs
Position
21:complement(15965415..16019586)
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AA seq
1029 aa
AA seq
DB search
MADKTPGGSQKASSKSRSSDVHSSGSSDAHMDASGPSDSDMPSRTRPKSPRKHNYRNESA
RESLCDSPHQNLSRPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEF
LAAFEGSDGNKVKTFVRGGVVNAAKDEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPP
SLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDG
QRRSMDVPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPL
ASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPP
HPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVV
IPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSI
LQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRD
KLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSD
VLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDW
AIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDAAP
MDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWE
LFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPVREEMTESKFSKYSEMSEEK
RAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKK
DKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERS
HKESSRSRSSHKDSPRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRS
HKKSKKNKH
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaaacgccaggcggatctcagaaggccagttcaaagagccgatcatcagat
gttcattcatctggatcttcagatgcacatatggatgcatctggaccctcagatagtgat
atgccaagtcgaacacgacctaaaagcccaagaaaacacaattataggaatgagagtgca
cgtgaaagcctttgtgattctcctcatcagaatctctcaagacctcttctagaaaacaag
cttaaagcattcagtattggaaaaatgagcacagcaaagcgaactctaagtaagaaggaa
caagaggagttgaagaaaaaggaggatgaaaaggcagctgctgaaatttatgaggaattt
cttgctgcttttgaaggaagtgatggtaataaagtgaaaacgtttgttcgaggcggggtt
gttaatgcagctaaagatgaacatgaaacagatgaaaaaagaggtaaaatatataagcca
tcttcaaggtttgcagatcaaaaaaatcctccaaatcagtcatccaatgaaaggccacca
tctcttcttgtgattgagacgaaaaagcccccactgaagaaaggggagaaggaaaagaaa
aaaagcaatttggaacttttcaaagaagaactaaaacaaattcaggaagaacgtgatgag
agacataaaacaaaaggcaggttaagtcggtttgagcctcctcagtcagactctgatggt
cagcgacgttctatggatgtgccttcaagaagaaatagatcgtctggtgttcttgatgat
tatgcacctggctcacatgatgtaggagatcccagcactacaaatttataccttggaaac
attaatccacagatgaatgaagaaatgctgtgccaagaatttggaagatttggaccatta
gctagcgtaaaaatcatgtggcccagaaccgatgaagaaagagcacgagaaagaaactgt
ggctttgtggcttttatgaatagaagagatgctgaaagagctctaaagaatttaaatggg
aaaatgattatgtcttttgaaatgaagctaggttggggtaaagctgtacctattcctcca
catccaatatacattccaccttctatgatggaacacacactccccccgcctccatccgga
ctgccttttaatgcgcagcctagagagcgattaaaaaaccccaacgctcccatgttacca
ccacctaaaaacaaggaggatttcgagaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttactcgccctgatacaccgaatgatagaatttgttgtacgt
gaagggccaatgtttgaagctatgattatgaacagagaaatcaacaatcctatgttcagg
ttcttatttgaaaaccagacaccagcccatgtttactacaggtggaagctttattctatt
ctgcagggagattctccaacgaaatggcggacagaagattttcgaatgttcaaaaatgga
tccttttggaggccaccaccattgaatccataccttcatgggatgtcagaggagcaagag
acagaagcttttgtagaagagcctagtaagaagggagcactcaaggaagaacagcgggat
aaattagaagaaatcttgcgaggattaactccaaggaaaaatgatattggagatgccatg
gttttctgtcttaataatgctgaagctgctgaagaaatagtggattgcattactgagtcg
ttgtccatcctaaagactcctcttcccaagaagattgccagattatatttggtttctgat
gttttatacaactcttcagccaaagttgccaatgcttcctattacaggaaattttttgaa
acaaagctatgtcagatattttcagacctcaatgctacttatcgtacaattcaaggccat
ttacaatctgaaaactttaagcaacgggtaatgacctgcttcagagcatgggaagattgg
gcaatttatccagaaccatttttgatcaaacttcagaatattttcctaggacttgtaaat
atcattgaagaaaaggaaacagaggatgtgccagacgatcttgatggtgctcccattgag
gaagagcttgatggtgctcctctggaagatgtcgatggcattcccattgacgccgctccc
atggatgaccttgatggtgtccctataaagagtctggatgatgatctggatggggtgccg
ttggatgcaactgaagactcaaagaagaatgagcccatatttaaagttgccccatcaaaa
tgggaggctgtagatgaatctgagttggaagcacaagcggtaacgacttctaagtgggag
ttatttgaccagcatgaagaatcagaagaagaagaaaaccaaaatcaggaggaagaaagt
gaagatgaagaagacactcagagttccaagtcagaagaacatcatttgtactctaaccca
gtcagagaagagatgaccgagtcgaagttctccaagtactctgaaatgagtgaagaaaaa
cgagctaaacttcgtgaaattgagctaaaagttatgaagtttcaagatgaattggaatct
ggaaagagacctaaaaaaccaggccaaagcttccaggagcaagtagagcactacagagac
aagctgctgcagcgggagaaggagaaagaattagaaagagaacgagaaagagacaaaaaa
gataaagaaaaattggaatctcgatccaaagacaagaaggaaaaggacgaatgtactcct
acgagaaaagaaaggaagagacgacatagtacctcccccagcccatctcgaagtagcagt
ggtcgtcgagtgaaatccccatcacccaaatcagagcggtctgaacggtcagaaaggtct
cataaggagagctcacggtccaggtcctctcacaaagactctcctagagacgctagcaag
aaagccaaaaggtcaccgtctggttcaaggacacctaaaaggtctaggcggtctcggtct
aggtcccctaagaaatcagggaagaaatccagatctcagtcccgctctccacacaggtct
cataaaaagtcaaagaaaaacaaacactga
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