Arvicanthis niloticus (African grass rat): 117693448
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Entry
117693448 CDS
T08817
Symbol
Lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04151
PI3K-Akt signaling pathway
anu04510
Focal adhesion
anu04512
ECM-receptor interaction
anu04820
Cytoskeleton in muscle cells
anu05145
Toxoplasmosis
anu05146
Amoebiasis
anu05165
Human papillomavirus infection
anu05200
Pathways in cancer
anu05222
Small cell lung cancer
anu05410
Hypertrophic cardiomyopathy
anu05412
Arrhythmogenic right ventricular cardiomyopathy
anu05414
Dilated cardiomyopathy
anu05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117693448 (Lama1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117693448 (Lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117693448 (Lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117693448 (Lama1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117693448 (Lama1)
09162 Cancer: specific types
05222 Small cell lung cancer
117693448 (Lama1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117693448 (Lama1)
09174 Infectious disease: parasitic
05146 Amoebiasis
117693448 (Lama1)
05145 Toxoplasmosis
117693448 (Lama1)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
117693448 (Lama1)
05412 Arrhythmogenic right ventricular cardiomyopathy
117693448 (Lama1)
05414 Dilated cardiomyopathy
117693448 (Lama1)
05416 Viral myocarditis
117693448 (Lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_I
Laminin_B
Laminin_N
Laminin_II
Laminin_G_3
Hepar_II_III
Motif
Other DBs
NCBI-GeneID:
117693448
NCBI-ProteinID:
XP_034339998
EnsemblRapid:
ENSANLG00005017738
LinkDB
All DBs
Position
21:complement(49388665..49513479)
Genome browser
AA seq
3083 aa
AA seq
DB search
MRGSGTGAALLVLLASVLWVTVRSQQRGLFPAILNLASNAHISTNATCGEKGPEMFCKLV
EHVPGRPVRHAQCRVCDGNSTNPRERHPISHAIDGTNNWWQSPSIQNGREYHWVTITLDL
RQVFQVAYVIIKAANAPRPGNWILERSVDGVKFKPWQYYAVSDTECLTRYKITPRRGPPT
YRADNEVICTSYYSKLVPLEHGEIHTSLINGRPSADDPSPKLLEFTSARYIRLRLQRIRT
LNADLMTLSHRDLRDLDPIVTRRYYYSIKDISVGGMCICYGHASSCPWDEEAKQLQCQCE
HNTCGESCDRCCPGYHQQPWRPGTISSGNECEECNCHNKAKDCYYDNNVAKERRSLNIAG
QYSGGGVCINCSQNTTGINCETCIDQYYRPHKVSPYEDQPCRPCDCDPVGSLSSVCIKDD
LHADLANGKWPGQCPCRKGYAGDKCDHCQFGYRGFPNCVPCDCSTVGSLNEDPCTEPCVC
KKNVEGKNCDRCKPGFYNLKERNPEGCSECFCFGVSDVCDSLTWSISQVTNMSGWLVTDL
ISPNKIRSQQDALGGHRQISINNTAVMQRFTSTYYWAAPEVYLGNKLTAFGGFLKYTVSY
DIPVETVDSDLMSQADVIIKGNGFTVSTRAEGLSLQPYEEYFNVVRLVPENFRDFNTRRE
IDRDQLMTVLANVTHLLIRANYNSAKMALYRLDSVSLDIASPNAIDLAVAADVEHCECPQ
GYMGTSCEACLPGYYRVDGILFGGICQPCECHGHSFECDIHGICSACTHNTTGDHCEQCL
PGFYGTPLRGTPGDCQPCACPLSIDSNNFSPTCHLTDGEEVVCDQCAPGYSGAWCERCAD
GYYGNPTVPGGSCVPCNCSGNVDPLEAGHCDSVTGECLKCLWNTDGAHCERCADGFYGDA
VTAKNCRACNCHENGSLSGICHLETGLCDCKPHVTGQQCDQCLSGYYGLDTGLGCVPCNC
SVEGSISDNCTEEGQCHCVPGVSGKQCDRCLHGFYAFQDGGCTPCDCAHTQNNCDPDSGE
CLCPPHTQGLKCEECEEAFWGLDLEQGCQACNCSVVGSTSPQCDVLSGHCPCKEGFGGQS
CHQCSLGYRSFPDCVPCDCDLRGTLADTCDLEQGLCSCSEDGGTCSCKENVLGPQCDKCR
VGTFALRGDNPLGCSPCFCFGLSQICSELKGYVRTPVTLASDQPLLHVVSQSNLQGTIEG
VHFQPPDTLLDAETVRQHIYSEPFYWRLPKQFQGDQLLAYGGKLQYSVAFYSTIGTGTSN
YEPQVLIKGGRARKHIIYMDAPAPENGVRQDYEVGMKEEFWKYFNSVSEKHVTHSDFMSV
LSNIEYILIKASYGQGLQQSRIANISMEVGRKAVEGPPEGEAASLLELCVCPPGTAGHSC
QDCAPGYHRGKLPESGGRGPRPLLAPCVPCTCNNHSDVCDPETGKCLNCGDHTTGDHCEL
CAPGYYGKVTGLAGDCTPCTCPHHPPFSFSPTCVLEGDSGFRCNACLPGYEGQHCERCSA
GYHGNPQAAGGSCQKCDCNPQGSVHSDCDRASGQCVCKPGATGLHCEECLPRHILLESDC
VSCDDDCVGALLNDLDSVGDAVLSLNLTGVSPAPYGILENLENTTKYFQSYLLKENAKKI
QAEIQLEGITEQTKNLQNELTRVLRGHQQVNAAIEKTSKRTQALATFLEQLHTNIKEITE
KVATLNQTTREDFQPPVSALQNLHQNISSLLGLIKKRNFTEMQQSATLELKAAKDLLSQI
QKKFQKPQEKLKALKEASSLLSNHSEELQAAEALLREAGSKTQESNLLLLLVKANLKDFR
EKKLHLQGEQNLTSTLIAKGREWVDAARTHAAVAQDTLTQLEHHRDELLLWASKIRSHVD
DLVMQMSKRRARDLVHRAEQHASELQSGAGALDRDLDNVRNVSLNATSAAHVHASIQTLT
EEAERLAADALKTANKTSLVSESLASRGKAVLQRSSRFLKESISTRKKQQGVKLKLDELT
YLTRQFQESVDNITKQANDSLMTLRENPGDMREKGRKTRDLAAAANESAVKTLEDVLGLS
LRVFNTSEDLSRVNATVQETNDLLRNSTMTTLLAGRKMKDMEMQANLLFDRLKPLKTLEE
NLSRNLSEIKLLISRARKQAASIKVAVSADRDCIRAYQPQISSTNYNTLILNVKTQEPDN
LLFYLGSSSSSDFLAVEMRRGKVAFLWDLGSGSTRLEFPDVSINNNRWHSIYITRFGNMG
SVSVKEASAAENPPVRTSKSPGPAKVLDINNSTLMFVGGLGGQIKKSPAVKVTHFKGCMG
EAFLNGKSIGLWNYIEREGKCNGCFGSSQNEDSSFHFDGSGYAVVEKTLRPTVTQIIILF
STFSPNGLLFYLASNSTKDFLSIELVRGRVKVMVDLGSGPLTLMTDRRYNNGTWYKIAFQ
RNRKQGLLAVFDAYDTSDKETKQGETPGAASDLNRLEKDLIYVGGLPHSKAVRKGVSSRS
YVGCIKNLEISRSTFDLLRNSYGVRKGCSLEPIQSVSFLKGGYIEMPPKSLSPESSLLAT
FVTKNSSGIILAALGKDAEKAGGSQAHVPFFSIMLIEGHIEVHVSFGDGTNLRKALLHAP
TGSYSDGQEHSISLVRNRRVITIQLDENSPVEMKLGPLTEGRTINISNLYIGGLPEDKGT
PMLRMRTSFHGCIKNVVLDAQILDFTHATGSEQVELDTCLLAEEPMQGLHREHWELPPEP
PTLPQPELCAVDTAPGYVAGAHQFGLSQNSHLVLPLNQSDIRKRLQVQLRIRTFTSSGLI
YYVAHQNQMDYATLQLQEGHLHFMFDLGKGRTKVSHPALLSDGKWHMVKTEYIKRKAFMT
VDGQESPSVTVVGNATTLDVEGKLYLGGLPGHYRARNIGAITHSIPACIGEVTVNGQQLD
KDRPASAFAVDRCYAVAQEGTFFEGSGYAALVKEGYKVRLDLNITLEFRTSSKNGVLLGI
SSAKVDAIGLEIVDGKVLFHVNNGAGRITATYEPRATRALCDGKWHTLQAHKSKHRIVLT
VDGNAIRAESPHTHSTSADTNDPIYVGGYPAHVKQNCLSSRASFRGCMRNLKLSRGSQVQ
SLDLSRAFDLQGVFPHSCPGPEP
NT seq
9252 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcagcggcacgggagccgcgctcctggtgctcctggcctcggtgctctgggtc
accgtgcggagccagcagagaggcttgttccctgccattctcaacctggcctccaatgcc
cacatcagcaccaatgctacctgtggagagaaggggcctgagatgttctgcaaactcgtg
gagcatgtgccgggccggcctgtccgacacgcccaatgtcgggtctgtgatggtaacagt
acgaatcctagagagcgccacccaatatcacatgcgattgatggcaccaataactggtgg
cagagccccagtattcagaatgggagagagtatcactgggtcaccatcaccctggactta
cggcaggtctttcaagttgcatatgtcatcattaaagccgccaatgcccctcggcctgga
aactggattttggagcgctctgtggatggtgtcaagttcaaaccctggcagtactatgca
gtcagtgatacagagtgtttgacacgctacaaaataactccacggcggggacctcccact
tacagagctgacaatgaagtcatctgcacctcgtattattctaagctggtgccacttgaa
catggagagattcacacatcactcatcaatggcagacccagcgctgacgacccctcaccc
aagttgctggaattcacctcagcacggtacatacgcctccgtctgcagcgcatcagaaca
ctcaacgcagacctcatgacccttagccatcgggatctcagagaccttgaccctattgtc
acaagacgttattactattcgataaaagacatttctgttggaggcatgtgcatttgctat
ggccacgctagcagctgcccatgggatgaagaagcaaagcaactacagtgtcagtgtgaa
cataatacatgtggggagagctgcgacaggtgctgtcccggctaccatcagcagccatgg
aggcccggaaccatttcctctggtaacgagtgtgaggaatgcaactgtcacaacaaagcc
aaagactgttactatgacaacaatgttgcaaaggagaggagaagccttaacattgcaggg
cagtacagtggtggaggggtttgtatcaactgctcgcagaacaccacagggatcaactgt
gaaacctgtatcgaccagtattacagacctcacaaagtatctccttacgaggaccagcct
tgccgtccctgtgactgtgaccctgtggggtctctcagttctgtctgtatcaaggatgac
ctccatgcagacttagccaatgggaagtggccaggtcagtgtccatgtaggaaaggttat
gcaggagacaaatgtgaccactgtcagttcggctaccggggtttcccgaattgcgtcccc
tgtgactgcagcactgttggcagcctgaacgaggacccatgcacagagccgtgtgtttgt
aagaaaaatgtcgaggggaagaactgtgatcgctgcaagccaggattctataacttgaag
gaacggaaccccgagggctgctctgagtgtttctgcttcggtgtctctgatgtctgcgac
agcctcacctggtccatcagtcaggtgaccaatatgtcagggtggctggtcactgacttg
atcagcccaaataagatccggtctcagcaggacgccctgggtggacaccgtcagatcagc
atcaacaacacggcagtcatgcaaagatttacttccacttactactgggcagctcctgag
gtctaccttgggaacaagctgacagcatttggtgggttcctgaaatacacagtgtcttat
gacatcccggtggagacggtggacagtgacctcatgtctcaggctgacgtcattatcaag
ggaaatgggttcactgtaagcacaagggcggagggcctgtccttgcaaccctatgaggaa
tacttcaacgtggttagacttgtgcctgagaacttccgggactttaataccagaagggag
attgaccgtgaccagctgatgactgtcttggccaatgtgacacatctcttgatcagagcc
aactataattctgctaaaatggcactctataggctagattccgtctctctggacatagca
agccctaatgctattgatctggcagtagctgctgatgtagaacactgcgaatgtccccaa
ggctacatggggacctcctgtgaggcctgtctccctggttattaccgagtagatggcata
ctctttggaggaatctgtcagccctgcgaatgccacggccactcatttgagtgtgacatt
catggaatttgctctgcatgtacacacaacaccacaggggatcactgtgagcagtgcctg
cctggcttctacgggacacctttacgtgggacaccaggggactgccagccctgtgcctgc
cctctctccattgactctaacaatttcagccctacctgccacctcaccgatggagaggaa
gtggtctgcgaccagtgtgccccgggttactcaggagcctggtgtgagagatgtgcagac
ggttactatggaaacccaacagtgccagggggatcttgtgtaccatgcaactgcagtggc
aatgttgatcccctggaggctggccactgtgactctgtcacaggggaatgcctgaagtgc
ttgtggaacacagacggtgcccattgtgagagatgtgcagatggcttctatggagatgca
gtgactgccaaaaactgccgagcctgtaactgccacgagaacggctccctttctggcatc
tgccacctggaaactggactgtgtgactgcaaacctcacgtgacaggacagcagtgtgac
cagtgcctgtctggctattatgggttggacacagggcttggctgcgtgccctgtaactgc
agtgtggaaggctccatatctgacaattgcacagaggaaggacagtgtcactgtgtacca
ggtgtctctggaaaacagtgtgacaggtgtttacatggcttctatgcattccaggatggt
ggctgcacaccctgtgactgtgctcatactcagaataattgtgaccccgattctggagag
tgtctctgcccccctcatactcagggtctgaagtgtgaggaatgtgaagaggcattctgg
ggtctggacctggaacaagggtgccaggcttgcaactgtagtgttgtgggctccacaagt
ccccagtgtgatgttctctctggccactgcccctgcaaagaagggtttggtgggcagagc
tgccatcagtgctccttgggctacagaagttttcctgactgtgttccctgtgactgtgat
ctgagggggacactggctgacacttgtgacctggaacagggtctctgcagctgctcagag
gatggtggcacctgctcctgcaaggagaatgtcctgggaccccagtgcgataagtgccga
gttggcacctttgccttgcgaggggacaaccctctaggctgcagcccctgtttctgcttt
ggtctatcgcagatctgctcggagttgaagggttatgtgaggactccagtaaccctcgcc
tccgatcagcccctcctgcacgtggtttcacagagcaacctccagggcacaattgaaggc
gtacacttccagcctcctgacaccttgctggatgcagagactgtccgccaacacatctat
tcagagccattttactggcggctcccaaagcagttccagggagatcagctcttggcctat
ggtgggaaactgcagtacagcgtggctttctactctaccattggcaccggaacatccaat
tatgagcctcaagtcctcatcaaaggaggtcgggccaggaagcacatcatttatatggat
gccccagcgccagagaatggagtgagacaggattacgaagtggggatgaaagaggagttt
tggaaatattttaactctgtgtctgagaaacatgtcacgcactctgattttatgtccgtc
cttagcaatattgagtacatcctcatcaaagcatcatacggccaaggactgcagcaaagc
agaattgccaacatctccatggaagttggcaggaaggctgtagaggggccccctgagggc
gaggctgcctcgctgttggagctctgtgtctgtcctcctggcactgctggacactcctgt
caggactgtgctcctgggtaccacagagggaagctcccagaaagtggaggcaggggaccc
cgccctctgctggctccttgtgtgccctgcacttgcaacaaccacagtgatgtctgcgac
cctgaaactggaaagtgtctgaactgcggagaccacacaactggggaccactgcgagctg
tgcgctcctggctactatgggaaggtgactgggctggctggagactgtaccccgtgcacc
tgccctcatcacccccctttcagtttcagccccacttgtgtcttggaaggtgacagtggt
ttccggtgcaatgcctgcctccctggctatgagggacagcactgtgaaaggtgctctgcg
ggctatcacggtaaccctcaagcagcaggtggcagctgccagaagtgtgattgcaacccc
caaggctctgtccatagtgactgtgaccgtgcatctgggcagtgcgtctgcaagccagga
gctacggggctccactgtgaggaatgcctgccgagacacatcctgttggagagcgactgt
gtttcctgtgatgatgactgtgtgggtgctttgctaaatgacctggattctgttggcgat
gccgttctgtctctgaacctcacgggcgtttcccctgctccatatggaattctggaaaat
ctggaaaatacaactaaatatttccagagttatttattaaaggaaaatgccaagaagatt
caagcagaaatccagcttgaaggtatcacagagcagacgaaaaatctgcaaaacgagctc
actagagtgttaagaggccaccagcaggtgaacgcagcgatagaaaaaacttccaagagg
actcaagccctggccaccttcctcgagcagctgcacacaaacatcaaagaaatcacagaa
aaggtggcaacgctgaatcagaccacacgtgaagatttccagccacctgtttctgctctt
cagaacctgcaccagaacatttcatctctgctgggacttatcaagaaaagaaacttcaca
gagatgcagcagagtgccacccttgaactcaaggccgccaaagacttattgtcacagatt
cagaaaaagtttcagaagcctcaagaaaagttgaaggcattgaaggaggccagcagcctc
ctttcaaaccacagtgaggaactgcaggctgcagaggcgctcctgagggaagctgggagc
aagacccaggaaagcaacctcctgctgctccttgtcaaggccaacctgaaagacttcagg
gagaaaaagctgcatcttcaaggagaacaaaatctgacctcaacgctcattgccaaagga
agagagtgggtggatgctgccaggactcacgcagctgttgcacaagacaccctaacacag
ctggagcatcaccgagatgagctcctattgtgggccagtaaaatcaggagccatgtggat
gacctcgtcatgcagatgtccaaacggagagcccgtgaccttgtccacagagcggaacag
catgcctctgagttgcagagcggagcaggagctttggacagagacctggacaacgttaga
aacgtgtcactgaacgccaccagtgcagcacatgtccacgccagcatccagacactgacg
gaggaagcagagaggctggctgcggatgctctcaagacagcgaataagacaagcttggtc
tccgaatccctggcttctcgggggaaagcagtccttcagcgctcgtccaggtttctaaaa
gaaagtatcagtaccaggaagaagcagcaaggcgttaagctgaagctggatgagttgaca
tatttgacgcgtcaatttcaggagagtgtggataacatcacaaaacaggccaacgactcc
ctcatgacactcagagaaaaccctggagatatgagagagaaaggcaggaaaaccagggat
ctggcagcagcagccaacgagagtgcagtgaagacactggaggacgtgctgggtttgagc
ctaagggtcttcaacacatcagaggacctgtccagagtaaatgccacagtccaggagaca
aacgaccttctgcgtaactccacaatgaccactctgttggctggaagaaaaatgaaagac
atggaaatgcaagccaacctcttattcgatcgattgaagcctttgaaaacactggaagaa
aacctgagcagaaacctgtccgagatcaagttgctgatcagccgggcccggaaacaagca
gcttcgatcaaagttgctgtgtctgcagacagagactgcatccgcgcctaccagcctcag
atttcttctaccaattacaacaccttgatactgaacgttaagacacaggagcccgacaac
cttctcttctacctcggcagcagtagcagctctgattttcttgcagtggagatgcggcgg
gggaaagtagcctttctctgggatctgggctccgggtccacaaggttggaattcccagat
gtctccatcaataacaacagatggcacagcatctacataaccaggtttggaaacatgggg
tccgtgagcgtaaaagaagcaagcgcagctgagaacccaccagtcaggacaagcaaatct
cctggacccgcgaaggttctggacataaacaattcaacactaatgtttgttggagggctt
ggaggtcaaatcaagaaatcccccgctgtgaaggttactcattttaagggctgtatggga
gaagccttcttgaatggcaaatcgattggcctgtggaattacatcgaaagagaggggaag
tgcaatggctgctttggaagctcccaaaacgaagactcttccttccattttgatggaagc
gggtacgcagttgtggagaagacgctccggcccactgtaacacagataataattctcttc
agcaccttctccccgaatgggctccttttctacctggcttcaaacagcaccaaggacttc
ctttccatcgaactggtccgtggcagggttaaagtgatggtggacctggggtcaggaccc
ctcactcttatgacagacaggcggtataacaatggaacctggtataaaatcgccttccag
cggaaccggaagcaaggactgctagctgtcttcgatgcatatgacaccagtgacaaggag
acaaaacaaggagaaactccaggagccgcttccgacctcaatcggctggagaaagacctg
atttacgtgggtggattacctcactctaaggctgtgaggaaaggggtcagcagcagaagc
tatgtgggctgtatcaagaacctggagatatcaaggtccacctttgatttgctgagaaat
tcctatggtgtgagaaaaggatgctctctggagcctatccagagtgtgagtttcctgaaa
ggtggctatatagagatgccacccaagtctctatcaccagagtcatccctgctggccaca
tttgtcaccaagaacagcagtggaatcatcctggctgcccttggcaaggatgcggagaag
gccggtgggtctcaggcacatgtgcccttcttttccatcatgctgattgaaggccacatc
gaagtacatgtcagtttcggggatgggaccaatctgaggaaggccctcctgcatgccccc
accggctcctacagtgatggacaagaacattccatctccctggttaggaatcggagagtt
atcaccatacaactggatgagaacagtcctgtagagatgaagttgggtccgttaacagaa
ggaaggacaatcaacatatccaacctatacatagggggacttcctgaggacaaggggacc
ccaatgctcaggatgcggacttcgttccatgggtgtattaaaaacgtggttctcgacgct
caaattttggacttcacccatgcgactggctctgaacaagtggaactggacacatgcttg
ctggcagaagagcccatgcagggcctgcacagagaacactgggagctccctccagagccc
ccaactctaccacagcctgaactgtgcgctgtggacacggctccggggtatgtggcgggt
gctcaccagtttggcctctcccagaacagccacttggtgctccctctcaatcagtctgac
atccggaagaggctccaggtacagctgaggatccggacgtttacctccagtggcctcatt
tactacgtggctcatcagaaccaaatggactacgccacactccagctccaagagggccac
ctgcacttcatgtttgacctcggcaagggccgaaccaaggtctcccaccctgccctgctt
agtgatggcaagtggcacatggtcaagacggagtacattaaaagaaaggcattcatgacc
gttgatggccaagagtcccccagtgtgaccgtggtgggcaatgcaactacattggatgtg
gaagggaagctgtacctcggaggccttcctggtcactacagggccaggaacatcggagct
atcactcacagcatccctgcctgcattggggaagtgacggttaacggccaacagctggat
aaagacaggcccgcgtctgcctttgctgtggacaggtgctatgcggtagcccaggaagga
actttctttgaaggaagtggatatgcagctcttgtcaaggaaggctacaaagttcgattg
gatttaaatatcacactggagttccgtacttcctctaagaatggcgtcctcctgggaatc
agcagtgccaaagtggatgccattggcctagagattgtagatggcaaggtcttatttcac
gtcaacaacggtgctggaaggataacagccacttacgagcccagagccaccagagctctc
tgtgatgggaaatggcacacgctccaagcccacaaaagcaagcaccgcatcgtcctgact
gtggatgggaatgccattagggctgaaagcccccacacccattccacctcggcggacact
aacgatcccatttatgtgggtggctatcctgcccacgtcaaacagaactgcttgagcagc
cgggcctcgttccggggctgtatgaggaatctcaagctgagtaggggttcacaggtgcaa
tccttggacttgagcagagcctttgacctacaaggagtcttccctcattcctgccccggg
cctgagccctga
DBGET
integrated database retrieval system