Arvicanthis niloticus (African grass rat): 117693492
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Entry
117693492 CDS
T08817
Symbol
Rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
anu03009
]
117693492 (Rrp9)
Ribosome biogenesis [BR:
anu03009
]
Eukaryotic type
90S particles
Other 90S particles
117693492 (Rrp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_IFT122_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
117693492
NCBI-ProteinID:
XP_034340062
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Position
21:26674651..26687961
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AA seq
525 aa
AA seq
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MRPGFSSHVSEFFSSGSGALMNSMSTAVATRKRAKPAPGPGAAPVAGKRRRKVDSAADRG
KSKGGGKMNEEISSDSESESLAPRKTEEEEEEELEETAQEKKLRLAKLYLEQLRQQEEEK
AEARAFEEDQVAGRLKEDVLEQRGRLQKLVAKEIQAPAPTDIRVLRGHQLSITCLVITPD
DLAIFSAAKDCTIIKWSVETGRKLHVIPRAKKGPQGQPSGHSSHILCMAISSDGKYLVRL
GWPCGRVEVWVGGMCLWSLPSFPQASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFR
RGTHQLYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVW
KIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLHGE
AGLEQPFWISSVAALLNTDLVATGSHNARVRLWQCGEGFRQLDPLCDIPLVGFINSLKFS
SAGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLRRLPVSPVAGS
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccgggtttagcagccatgtgagtgagttcttcagcagcggcagcggcgccttg
atgaacagtatgtcgaccgccgtggcaactcgtaagcgggcaaagccagctcccgggccc
ggggcggctccggtggccggcaagcggcgacgaaaggtagactccgctgccgacagaggc
aagtcgaagggtggcggcaaaatgaatgaagagatttccagcgattctgagagtgagagc
ttggctccaagaaaaacagaggaagaggaggaggaagagctggaggagactgcacaggaa
aagaagttacgcttggccaaactctaccttgaacaactcaggcagcaagaggaggagaag
gctgaagcccgtgcatttgaggaggatcaggtggccgggcgcttgaaggaggatgtgctc
gagcagagaggcaggctgcagaaattggtggcaaaggagattcaggccccagctcccacc
gacattcgagttttgcggggccaccagctctccatcacgtgcttggtcatcactcctgat
gacctggccatcttctccgctgccaaagactgcaccatcattaagtggagtgtagagact
gggcggaagctgcatgtgatccctcgagccaagaagggtccccagggacagccttcaggc
cacagcagccatatcctctgcatggccatctcctctgatggcaagtacctcgtaagactg
ggctggccctgtgggcgggtggaggtgtgggtgggtggtatgtgcctgtggtcattacct
tccttcccacaggcctctggtgaccgtagcaagctcattctcatttgggaggcccagagc
tgccagcacctgtacaccttcacgggacaccgggacgccgtgtcgggactggccttccga
agaggtacccaccagctctatagcacttcccacgaccgctctgtgaaggtgtggaatgca
gccgagaactcctacgtggagacgctgttcgggcaccaggatgctgtggctgccttggac
gccttgagccgagagtgctgtgtgacagccgggggccgggatggcactgtgcgtgtgtgg
aagatcccagaggagtcccagcttgtcttctatggccaccagggttccattgactgcatc
catctgatcaacgaggagcacatggtgtcgggtgcagatgatggctctgtggccttgtgg
ggcctctccaagaaacggccgctcgccctccagcgtgaagctcatgggcttcacggggaa
gcaggcctggagcagcccttctggatatcttccgtggcagcccttctcaatacagacctt
gtagccacaggctcccataatgcccgtgtgcgactttggcagtgtggagagggcttccgg
cagctcgaccctctctgtgacatccccctggttggttttatcaacagcctcaagttctcc
agtgctggggactttttggtggctggagtgggacaggaacacaggcttggccggtggtgg
aggatcaaggaggcccggaactcagtctgcatcatcccgctccgcaggctccctgtgtcc
cctgttgctggctcctga
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