Arvicanthis niloticus (African grass rat): 117693740
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Entry
117693740 CDS
T08817
Symbol
Fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03030
DNA replication
anu03410
Base excision repair
anu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117693740 (Fen1)
03410 Base excision repair
117693740 (Fen1)
03450 Non-homologous end-joining
117693740 (Fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anu03032
]
117693740 (Fen1)
03400 DNA repair and recombination proteins [BR:
anu03400
]
117693740 (Fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117693740 (Fen1)
DNA replication proteins [BR:
anu03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
117693740 (Fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
117693740 (Fen1)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
117693740 (Fen1)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117693740 (Fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
XPG_I_2
DUF3560
HHH_5
EAP30
Motif
Other DBs
NCBI-GeneID:
117693740
NCBI-ProteinID:
XP_034340369
LinkDB
All DBs
Position
1:complement(118504549..118509633)
Genome browser
AA seq
380 aa
AA seq
DB search
MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET
TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGME
EQVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDM
DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYCESIRG
IGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHKEAQQLFLEPEVLDPESVELKWSE
PNEEELVKFMCGEKQFSEERIRSGVKRLSKSRQGSTQGRLDDFFKVTGSLSSAKRKEPEP
KGPAKKKAKTGGAGKFRRGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcaaggccttgccaaactaattgctgatgtggcccccagtgccatccgtgag
aatgacatcaagagctactttggtcgaaaagtggccatcgatgcctccatgagcatttac
cagttcctgattgctgttcgtcagggtggggatgtgctgcagaacgaggagggggagacc
accagccacctgatgggcatgttctaccgtaccatccgcatgatggaaaatggcatcaag
cctgtgtatgtcttcgatggcaaaccaccacagctgaagtcaggcgagctggccaaacgc
agcgagaggcgcgccgaggctgagaagcaactgcagcaggctcaggaggctgggatggag
gagcaggtggaaaagttcactaagcggcttgttaaggtcaccaagcaacacaatgacgag
tgcaaacacctgctgagcctcatgggcatcccgtaccttgatgcccccagcgaggcagag
gccagctgtgctgccctggcaaaggccggcaaagtctatgccgcggccacggaggacatg
gactgcctcacttttggcagccccgtgctaatgcgacacttgactgctagtgaggccaag
aagctgcccatccaagagttccacctgagccgcgtcctgcaagagctgggtctgaaccag
gagcagtttgtggatctgtgcatcctgctgggtagcgactactgcgagagtatccgtggc
attgggcccaagcgggctgtggacctcatccagaagcataagagcatcgaggagattgtg
aggcggctggatcccagcaagtaccctgttccagaaaactggctccacaaggaagcccag
caactcttcctggagcccgaagtactggacccagagtctgtggagctgaagtggagcgag
ccaaatgaagaagagttggtcaagtttatgtgcggtgagaagcagttttctgaggagcga
attcgcagtggggtcaagcggctgagtaagagccgccagggcagcacccagggtcgccta
gatgatttcttcaaagtgacaggctcactttcctcagctaagcgcaaggagccagaaccc
aaggggcctgctaagaagaaagcaaagactggtggagcggggaagttcagaaggggaaaa
taa
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